Candidatus Uabimicrobium helgolandensis: UABHE_000731
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Entry
UABHE_000731 CDS
T10824
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03030
DNA replication
uhl03430
Mismatch repair
uhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UABHE_000731 (dnaX)
03430 Mismatch repair
UABHE_000731 (dnaX)
03440 Homologous recombination
UABHE_000731 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uhl03032
]
UABHE_000731 (dnaX)
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_000731 (dnaX)
Enzymes [BR:
uhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UABHE_000731 (dnaX)
DNA replication proteins [BR:
uhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UABHE_000731 (dnaX)
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UABHE_000731 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RCF1-5-like_lid
RuvB_N
AAA_22
AAA_5
AAA_14
DNA_pol3_gamma3
AAA_19
AAA_7
ResIII
Rad17
AAA_18
AAA_assoc_2
Mg_chelatase
AAA_24
AAA_30
TIP49_C
DUF5835
Motif
Other DBs
NCBI-ProteinID:
XEY23002
LinkDB
All DBs
Position
complement(996530..998263)
Genome browser
AA seq
577 aa
AA seq
DB search
MDYLAFSRKYRPQNFDEVIGQQHIATTLKNAIVNNRVHHAYLFCGSRGVGKTSTARIFAK
ALNCPETQDGISCNKCVVCQRVAIGEDMDVLEVDGASNRGIEEIRNIKNDVKYLPSQGKY
KIFIIDEVHMLTQAAFNALLKTLEEPPSHVKFIFATTQVYSIPDTILSRCQRFDFRQIKI
EDAVELLKTVAKKENIEISKEALLQIAQIAKGALRNSVVLLDQIYSYSGNKIDIKDLEKV
LGNDSDYIFTALQALADKNAVKLLEVVELFSEEGGDFSNFIDQLAQQLRDLLVFSVSGEK
FISGTDFYIEQLKKLHGCFDQNYIFQAIQHIVTCKVHFQRGLLGRILLETLLLKIMNIES
LLPLDEMINCLNNLEKKNKIFTSQSAQNPLARNTQTQQSLPPNPLPPKGNLKGKNSPLDF
FQQPRNQKKNDIAISAQTFSPTKTSNVTKQPNITTTKTQEPKEAFLDILRQNIGRMANIL
RDDAKITKENNTLIIKMDISHKITIDMLKNKKNNPIVIQAAKKAYGGNTQVKLEYEGENQ
PRKNQEKQKAIAENDPIVSLCLELFSARVIKVEAIRK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggattatcttgcattttcaagaaaatatcgcccgcagaattttgatgaagttattggg
caacagcatatagcaacaacactcaaaaatgctatagtgaataaccgtgtccatcatgct
tatctattttgtggttcccgcggcgttggcaaaacttccacagcgcgtatttttgctaaa
gctcttaattgccctgaaacacaggatggtatttcttgtaataaatgtgttgtatgtcaa
agagttgccattggtgaggatatggatgtattagaagttgatggtgcatctaatcgtggt
atagaagaaattcgcaatataaaaaatgatgtaaagtatttaccatcacaaggaaaatac
aaaatttttattattgacgaagttcatatgttaacccaagctgcttttaatgcgctactc
aaaactcttgaagaaccaccttctcacgtaaagtttattttcgcaacaactcaggtttac
tctattccagatacaatactttctcgttgccaacgatttgattttcgacaaattaaaatc
gaggatgctgtagaacttttaaaaacggtggcaaaaaaagaaaatattgagattagtaaa
gaagccttgttgcaaattgcgcaaatagcaaaaggagctcttcgcaattcagttgtttta
ctagatcaaatatactcgtacagtggtaataaaatagatatcaaagatctagaaaaagta
ttgggtaacgatagtgactatatatttacagcactccaagctctagcagacaaaaatgca
gttaagttacttgaggtggtagagttgtttagtgaagaaggcggagatttttcaaatttt
atagatcaattagcacaacagttacgagatttactcgttttttcggtgtctggcgaaaag
tttattagcggaactgatttttacatagaacaattaaaaaaattacacgggtgttttgat
caaaattacatttttcaagcgatacaacacatagtaacttgtaaagttcattttcaaaga
ggtcttttggggcgtattttacttgaaacgctattacttaaaatcatgaacatcgaatcg
ttattaccattagatgaaatgattaattgtcttaataatttggaaaaaaaaaataaaatt
tttacatcgcaatcagctcaaaatccattagctcgaaatacacaaacacagcaatcattg
ccaccaaatccactccctccaaagggtaacttaaaaggaaaaaatagccctttagatttt
tttcaacaaccacgaaatcaaaaaaaaaatgatatagcgatttcggcacaaacattttct
ccaacaaaaacgtccaatgtaacaaagcaaccgaatataactacaacaaaaacacaagaa
ccaaaagaagcttttcttgatatactaagacaaaacattgggcgcatggcaaatattctg
cgcgacgacgcaaaaataactaaggaaaacaacactttaattatcaagatggatataagc
cataaaattacaatagatatgctgaaaaataaaaaaaataatcctattgtaattcaagcc
gctaaaaaagcttacggaggaaatacccaagtaaagctggagtacgaaggagagaatcaa
ccgcgtaagaaccaagaaaagcaaaaagctattgccgaaaacgatccaatcgtgtcttta
tgtctggaacttttttctgcaagagtaataaaagtagaagcgattagaaaatag
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