Candidatus Uabimicrobium helgolandensis: UABHE_001021
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Entry
UABHE_001021 CDS
T10824
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uhl03032
]
UABHE_001021 (gyrA)
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_001021 (gyrA)
Enzymes [BR:
uhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UABHE_001021 (gyrA)
DNA replication proteins [BR:
uhl03032
]
Prokaryotic type
DNA Topoisomerases
UABHE_001021 (gyrA)
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UABHE_001021 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CD1375-like
DUF6026
Motif
Other DBs
NCBI-ProteinID:
XEY23285
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Position
1410802..1413396
Genome browser
AA seq
864 aa
AA seq
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MTDTKQCPVVRLEDELKNSYLTYAMSVIVSRALPDVRDGMKPSQRRILLAMHDLNLGPSS
KFRKCAKIAGDTSGNYHPHGEAVVYPTLVRMAQSFNMRYPLIQGQGNFGSIDGDPPAAMR
YTEARLTAPSVNMLEDMDKDTVDFVSNYDETREEPTVLPSKFPNLLVNGSVGIAVGMSTS
IPPNNLTEICNGILEVIENPEVTVEEMCDIIKGPDFPTGAIICGQQDVHKAYQTGRGIIK
VRSKSEVEEKKNGRESIVFKEIPYQLNKAKVIEKIADLVKDGKITGISDVRDESGRKEPV
RIVVDLKRGENSDVILNQLYKYTLLQSSFSIIMLSLVNGRPQLLNIKEMIYYFIEHRKEI
IRRRTEFLLKKAEKRHHLVEGLILALNHIDEVIKVIRGSEDTKSAKLALREKWELSIAQS
DAIVQMRLGALTNLEFNKLDDERKNLEEQIATFKGILGDPKKILAIIKEETTAICEKYGD
KRRTEIGTAIENFVLEDIIADDQSVVLITHEGYIKRTPLEMYSKQHRGGKGVTGAGMKQG
DFVKDFFTASAHQYILFFSNYGKVYWLKVYDIPEMSRTAKGRALVNLLNLDQDENISSVI
PVREFDGRLLVMATKNGIIKKTALAAFSRPNKSGIRAINLDEGDRLISTVLTDGKQDLII
GTKLGRACRFNETEVRSLGRAARGVRGCRLLENDCVIGMVVVRDDHCLLTICEKGYGKRS
AYEAYRLTRRGVQGVLNFRRTEKTGDVVAIVSVREEDQMMIITTKGMVIRMGTASLRILS
RATQGVRLIRLKKKDSVVSIAKLSKEVLDSMGDESLGEDTVVDGEEVVDNDEATNNEATD
SENAADNESAETSEKTVTEQTETE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacaaagcagtgtccagttgttcggttagaagacgaacttaagaattcttac
ttgacctacgcaatgagcgtaatagtgtcgagagctctaccagatgtacgagatggtatg
aagccatcacaaagacgtattctcctcgctatgcacgatttaaatcttggcccatcgtca
aaatttagaaaatgtgcaaaaatagcaggggatacttctggtaactatcaccctcacggt
gaagcagttgtttatcctactttagtacgtatggcgcagagttttaatatgcgctatcct
ttaatccaaggccaaggaaactttggttctattgacggagatcctcctgcggcaatgcgt
tataccgaagcacgattaacagcaccaagtgtaaacatgttagaagacatggacaaagat
actgttgatttcgtgtctaactacgatgaaacgcgtgaagaaccaacggtattaccgtct
aaatttccaaatttacttgttaatggctctgttggtattgctgtagggatgtcaacttct
attcccccgaataacttgactgaaatttgtaatggtattctcgaagtgatagaaaatccc
gaagttacagtagaagaaatgtgcgacattataaaaggaccagattttcctacaggagct
attatctgtggacaacaagatgttcacaaggcttatcaaactggacgtggtatcatcaaa
gttcgttcaaaatctgaagttgaagagaaaaaaaatggtcgggaatctatagtttttaaa
gaaattccttatcagttgaacaaagctaaagtaattgaaaaaatagcagatctcgttaaa
gatggcaaaattactggtatctctgatgttcgcgacgaaagtggacgtaaagaacctgta
cgtattgttgtcgatttaaaacgtggtgagaatagcgatgttattcttaatcagttatac
aaatatactttattgcaatcaagtttttcaattatcatgctttctcttgtgaatggccga
ccacagcttctcaatattaaagaaatgatctattatttcattgagcatcgcaaagagatt
attcgtcgccgtacagaatttttgctcaaaaaagcagaaaaacgccaccaccttgtcgaa
ggattaatattagcgctcaatcatatagatgaagttattaaagtgattagaggctctgaa
gacacaaagtcagccaaattagctctacgagaaaaatgggagttaagtattgcgcagtca
gatgcaatagtgcaaatgcgcctaggggctttgactaatttagagtttaataaattggac
gatgaaagaaaaaatttagaagaacaaatagctactttcaaaggtatcttgggagatcct
aaaaaaatcttagccattattaaagaagaaactactgctatttgtgaaaaatatggcgat
aaaaggcgtacagaaattggtacagcaattgaaaattttgtgcttgaagatattattgct
gatgatcagtctgttgttttaattactcacgaagggtatattaaacgtactccactggaa
atgtactctaagcaacaccgtggcggaaagggtgttactggagcaggaatgaaacaggga
gattttgttaaggacttttttacagcttcagcacaccaatatatcttgttttttagtaat
tatggaaaagtgtattggcttaaagtttacgatatacctgaaatgtctcgtactgctaaa
ggacgtgcacttgttaatcttttaaatcttgatcaagatgagaatatcagttctgttatt
cctgttcgtgaatttgatggtagattactcgttatggcgacgaagaatgggattattaaa
aagacagccttagcggctttttctcgtcctaacaaaagtggaattcgcgctattaatctc
gatgaaggtgatcgtttaatttcaactgttcttaccgatggtaagcaagatttgattatc
ggaacaaagctaggaagagcatgtcgctttaacgaaacagaagtacgttcattgggacgt
gctgcaagaggtgttcgcggatgtcgattgcttgaaaatgactgtgttattggaatggtc
gttgtgcgcgatgatcattgtcttcttactatttgtgagaaaggctatggaaagcgttct
gcgtatgaagcttaccgtttgacaagacgtggagttcaaggagttttgaattttcgccgt
acagaaaaaacaggcgatgttgttgccattgtttctgtaagagaagaagaccaaatgatg
attattactacaaaaggaatggtcattcgcatgggaactgcttccttaagaatactctca
agagctacacaaggggttcgattgatacggttgaagaaaaaagattcagtggtctctatt
gcgaagctttcgaaagaagttcttgatagtatgggagatgaatctctaggtgaagatact
gttgttgatggcgaagaagttgttgacaatgatgaagctactaacaatgaagctactgat
agcgaaaatgcagctgataatgaaagtgctgaaacttcagaaaaaactgtaacagaacaa
acagaaacagaataa
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