Candidatus Uabimicrobium helgolandensis: UABHE_001518
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Entry
UABHE_001518 CDS
T10824
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uhl03009
]
UABHE_001518
Enzymes [BR:
uhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
UABHE_001518
Ribosome biogenesis [BR:
uhl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
UABHE_001518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XEY23763
LinkDB
All DBs
Position
complement(2072730..2073431)
Genome browser
AA seq
233 aa
AA seq
DB search
MKIRILYEDENLLAIDKPAGLVCHPVGGYQGDTVVSQLSYLYPEDIHLLHRLDKNTSGVL
LVTRGKKIIKKMYNQFARRLICKTYLAVVHGVVKSHQGTIELPIARACSASLIKLKMTTE
NPQGLAAKTDYRVLNTTEEHSLLHLQPVTGRKHQIRLHVAAIGHPIVGDYLYCRSGIPFL
WQYYLQRSSPWHENIKGHALHAHSIEFEHPLLQDQIKISAPLPQHLDNIMKGF
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgcattctatatgaagatgaaaatctattagctattgataaacctgctggt
ttagtttgtcatccggtaggaggttaccagggagatactgtcgtatcgcaattatcttat
ctttatcctgaagatatacatttactacatcgcttagataaaaatacttcgggcgtttta
ttagtaacacgtggaaaaaaaataataaaaaaaatgtacaatcaattcgctcgtcgtttg
atttgtaaaacatatctcgctgttgttcacggtgtagttaagtcacatcaaggaacaata
gaacttcctattgcacgcgcttgtagtgcgtcacttatcaagctaaaaatgactacagag
aatccgcaaggattagctgctaagacagattaccgagtacttaatactacagaagagcat
agtttacttcatttacaaccagtcactggacgaaaacatcaaattcgtttgcatgttgct
gcaatagggcatcctattgtgggggattatctttattgccgctcagggattccttttctc
tggcaatattacttgcaaagatcttctccgtggcatgaaaatatcaaggggcatgcactt
catgctcactctattgagtttgagcaccctcttttacaagatcaaataaaaatatcagct
cctcttccacaacatttggacaatattatgaaaggattttaa
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