Candidatus Uabimicrobium helgolandensis: UABHE_001569
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Entry
UABHE_001569 CDS
T10824
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_001569 (truA)
Enzymes [BR:
uhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
UABHE_001569 (truA)
Transfer RNA biogenesis [BR:
uhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UABHE_001569 (truA)
Prokaryotic type
UABHE_001569 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
EXS
Motif
Other DBs
NCBI-ProteinID:
XEY23813
LinkDB
All DBs
Position
complement(2138383..2139180)
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AA seq
265 aa
AA seq
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MRYRYFFHIGYNGYRYSGWQRQINPATVQEIIEDKLEKIFKTKLHCIGCGRTDAMVHASQ
YFFHVDIRKDWDFDIVFRLNKMLPDDIVIFDVLTFPTKLHARFDARKRTYHYYLHMIKNP
FLSETSALYLIEKLDVEKMKQACDLLLLYDEYYSFCKSPNKYDNTLCNITCSQLFTTIDR
QRICFKITANRFLRGMVRVIVGRLIDIGLDKMSLSAFEEYLREKKASEFTHLAYPQGLHL
SKIEYSFLDLPNSNICEESGLWQEV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtatagatatttttttcatattggctacaatggatatcgttattctggttggcaa
agacagataaatccagctacagttcaagagatcatagaagacaaacttgagaaaattttc
aaaacaaaacttcattgtattgggtgtggacgaacagatgcaatggttcatgctagtcag
tatttttttcatgtagatattcgtaaagactgggattttgatattgtttttcgattaaac
aagatgttaccagatgatattgttatttttgatgtgctgacttttccaacaaaactacat
gctcgatttgatgcgcgaaagagaacgtatcattattatcttcatatgattaaaaatcct
tttttgagtgagacgagtgctttgtatttaatcgaaaaactcgatgttgaaaaaatgaaa
caagcatgtgatttactattgttatatgacgaatattattctttttgtaagtcaccaaat
aaatatgataatacgttatgtaatattacttgtagtcaattatttactactatagatcgc
caaagaatttgttttaaaataacagcaaatagatttttacgagggatggtacgtgttatc
gttggtaggcttattgacataggtttagataaaatgtccctgagcgcgtttgaggaatat
ctacgcgaaaaaaaagctagtgaatttactcatcttgcctatcctcaaggactacaccta
tcaaaaatagaatattcttttcttgatttaccaaattcgaatatttgtgaagaatctggt
ttatggcaagaagtatag
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