Candidatus Uabimicrobium helgolandensis: UABHE_001811
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Entry
UABHE_001811 CDS
T10824
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UABHE_001811 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_001811 (mutS)
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UABHE_001811 (mutS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
Motif
Other DBs
NCBI-ProteinID:
XEY24049
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Position
2495892..2498489
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AA seq
865 aa
AA seq
DB search
MSQTPMMKQYNAAKEKHQDSILFFRMGDFYEVFYEDAELCSRALGIALTARNKGENAVPM
AGVPVKSLDTYLTKLIQQGYRVAICEQIQEASEAQGIVERDVVRVITPGTITEEAVLNEK
SHNFLLAIAPLKKTIGLAWVDISTGTFEVHEIASCFLADELARIAPAECLVPEKKRDTVV
RVWESDLTISEIVKHQKSAITYRPDWFFAKSNAKRTLEEHLQVSSLEGFGCQNMNAGLGA
AGALFHYVKETQKSTLPHITKIVSYNAQEKMLLDSATRNCLEITRSLRSSNKNTLLAVID
ETQTAMGGRLLSNWLTSPLIVLEKIRARQQGVLEFIQHNEQHQNICKILASIQDIERLCA
RIASKRADARDLLALKNSLLVLPSLRDELQPFTSLIIKEIIKNLFSLETLATLLTSAIHE
QPKPTLKDGDIIRNGYNEELDKLRKVQSSGDKWLEDFQKREAENTGIPSLKVSFNKVFNY
YIEVTHTHSHRVPEHYVRKQTLKNAERYITAELKEYESDVLSANDRSKDLEYKLFQEIRE
EVQKYLNDLRSVAEAIACIDVLCSMAKTAKSRNYTCPELMNNHTLEIKEGRHPVLETTLD
TPFIANELSMEPGNEIMIITGPNMAGKSTYIRQNALIILLAQIGSFVPAKKAKIGIVDRI
FTRIGSADEIARGRSTFMVEMIETANILNNASAASFIVLDEVGRGTSTFDGVSLAWSIIE
HIQKKINARTLFATHYHEMSDLADIYPNVRNYNVAIQEWNGQVAFLHKILEGSADRSYGI
EVAKLAGIPQQVIHNSRKILMRLERHAIDVRNFTGQACRNQSSNNLFSMVGEDLIDTLSN
LNVETLTPIDALNILKELQIEAQNL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacgccaatgatgaaacagtataatgctgcgaaagaaaaacatcaggattct
attttgttttttcgtatgggagatttttacgaagtattttacgaggacgcagaattatgt
tcacgtgctttgggaattgctttaacagcacgcaacaagggagaaaatgccgttccaatg
gcaggagttcctgtaaaatcacttgacacttatttgacaaagttaattcaacaaggatat
cgtgttgctatatgcgaacaaatccaggaagcttcggaagcgcaaggtattgtcgaacgc
gatgttgtacgagtaataacccctggaacgattaccgaagaagcagtccttaacgaaaaa
agtcataactttttactagcaattgctcccttaaaaaaaacaattggccttgcgtgggtt
gatatatcaacaggaacattcgaagtacatgaaattgctagttgctttcttgcggatgaa
ttagcacgtattgcgccagctgaatgtttagtaccagaaaaaaaaagagatactgttgta
cgtgtttgggaaagtgatttaacgatctcggaaattgttaaacatcaaaagtccgcaatt
acttatcgccctgattggttttttgctaaaagtaacgccaaaagaacccttgaagagcat
ctacaagtaagttctttagaaggttttggttgtcaaaacatgaacgctggattaggggca
gccggtgcactatttcactatgtaaaagaaacgcagaaaagtacactccctcatatcacg
aaaattgtaagttacaacgcccaagaaaaaatgcttcttgactctgccactcgcaattgc
ttagaaataaccagatccttgcgatcgtcaaataaaaatactttacttgctgttattgat
gaaacacagaccgctatgggcgggagacttcttagcaattggttaacttctccactaatt
gttcttgaaaaaattagagcaaggcaacaaggagtgctggaatttatacagcacaatgaa
caacatcaaaatatttgtaagatattagcttcgattcaagacatagaaagattgtgtgct
cgtattgcaagtaaaagagctgacgcacgtgatttactcgcattaaaaaactctctttta
gtattgccttctcttcgcgatgaattacaaccatttacatctcttattataaaagaaatt
attaaaaacttattctctttggaaacactcgctactctactaacaagcgctattcatgag
caacctaaaccaacattaaaagatggtgatataattcgaaatggctacaatgaagagtta
gacaagttaagaaaagttcaatcttcaggtgataagtggttggaagattttcaaaaacgc
gaagcagaaaatacgggaattccttcacttaaagttagttttaataaagtcttcaattac
tacattgaagtaactcacacccatagtcaccgcgtcccagaacactacgtgcgcaaacaa
acacttaaaaatgctgaacgttacatcaccgctgaattaaaagaatatgaaagcgatgtt
ctttctgctaacgatcgcagtaaggatttagaatataaattattccaagaaattcgcgaa
gaggtgcaaaaatatctcaatgatttgcgaagtgttgctgaggcaatagcatgtattgat
gtactttgctctatggctaaaacagcaaaatcgcgaaactacacatgtccagaactgatg
aacaaccatactcttgaaataaaagaaggtcgccaccctgtccttgaaacaaccttggac
actccatttatagccaatgaactctccatggagccaggcaatgaaattatgattattact
ggtcctaatatggcaggaaaatccacgtatattagacaaaatgctttgattattttatta
gcgcaaattggttcctttgtacctgctaaaaaagctaaaattggcattgttgatcgcatt
tttactcgtataggatcagcagatgaaattgcaagaggtcgcagtacttttatggttgaa
atgatagaaacagcgaatatactaaataatgcgagtgctgcaagttttattgtcttagat
gaagttggacgtggtactagtactttcgatggagtctctcttgcatggtctattattgaa
cacatacaaaaaaaaatcaacgcacgtacattgtttgcaacacactatcatgaaatgtca
gaccttgcagacatttatccaaatgttcgcaattataatgttgccattcaagaatggaat
ggacaagttgctttcttgcacaaaatacttgaaggtagtgctgaccgtagttatggaata
gaagtagctaaattggctggtataccgcaacaagttattcacaactcacgcaaaattctt
atgcgcttagaaaggcatgctattgatgttcgtaattttacaggacaagcatgccgtaat
caaagtagtaacaatttattttctatggtgggagaagatctgattgatactctctcaaat
ctaaatgtagaaacactaacacctattgacgcattaaatattctaaaagagttgcaaata
gaagcgcaaaatttgtga
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