Candidatus Uabimicrobium helgolandensis: UABHE_001943
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Entry
UABHE_001943 CDS
T10824
Name
(GenBank) class I tRNA ligase family protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00450
Selenocompound metabolism
uhl00970
Aminoacyl-tRNA biosynthesis
uhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
UABHE_001943
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UABHE_001943
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
uhl01007
]
UABHE_001943
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_001943
Enzymes [BR:
uhl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
UABHE_001943
Amino acid related enzymes [BR:
uhl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
UABHE_001943
Transfer RNA biogenesis [BR:
uhl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
UABHE_001943
Prokaryotic type
Other AARSs
UABHE_001943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Cupin_2
AraC_binding
tRNA-synt_1e
MannoseP_isomer
Cupin_1
Cupin_7
tRNA-synt_1
Anticodon_1
Polo_box_3
ARD
CENP-C_C
MPI_cupin_dom
Cupin_3
Cupin_6
EGF_laminin
Motif
Other DBs
NCBI-ProteinID:
XEY24180
LinkDB
All DBs
Position
complement(2695499..2697427)
Genome browser
AA seq
642 aa
AA seq
DB search
MQVLSYDKKKLDSAYGILCRSLHKELVGDFTPFGLTFCKVTPGTSTAPHSHHENETFLIA
HGHGKIQINEEQQDVQAGDIIFIPAHSNHCLSNTTEQDLDFYSIYWTIAKNIDKDDAVQV
VIPAPPTPNGPLHLGHLSGPYLAADVAHRANSLFNRKSFHVMGTDDNQSYVCAKANDENC
SAQEITDRFCKRISKVIDDFNSDIYTFLHPTKDPEYPQFIASFYQQLKESGLAKISTRKA
PCCKTTGNVLYGSSIEGLCPNCRELTGGNGCENCGHYNDAWDLIDAKSTIGEGDIEFVDV
ARTYIDLEEYRSFLESFINSISMPEVMRAFYRDYLDTKLPVVSLSQPASWGIKAPNEDGN
VIYEWCEMAGGYLYLLEKINKQNAEIDFSAMKVNLTFGFDNAFFYGLLIPVLLKNSNVNF
QAFLTNYFLHLDGEKFSTSRNHAIWGEDMLRKLSPDPLRLYLSLIRSELSTTDFQMTHFK
SFFTNLKKWEELLEIINSQITNLPFVFSGNKSMSATEERFLFYFNRNCSEALSFYDAKNF
RLNKVARYVVGIMEDFHDFYYTEFIGNKNSDISFLLLALRRFSVLLQPIMPSYSTKLQSS
FQEKKCVVGEVEKSQGVVIKHFPTSFIKENSLLLKELENELV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtattatcgtacgacaaaaagaaactagacagtgcttatggcattttgtgtcgc
tctcttcacaaagaacttgtaggggattttactccttttggtttgactttttgtaaagta
actcctggcacaagtaccgctcctcactcccaccacgaaaacgaaacgtttttaatcgca
catggtcatggaaaaatacaaataaatgaagaacaacaagatgtacaggcaggcgatatt
atatttattccagcacatagcaatcattgtctttcaaacacaacagaacaagacctagat
ttttattcaatttactggacaattgcaaaaaatatagacaaagatgacgccgtccaagtg
gtgattcccgctccaccaacaccaaatggccctttgcatttagggcacctctcaggtcca
tacttagctgcagatgtagcccatcgcgccaattcactatttaaccgtaaatcatttcat
gttatgggaacagatgacaatcaaagttatgtttgtgcaaaagcaaacgacgagaattgt
tctgcgcaggaaatcacagatcgtttttgtaaacgtatttctaaagttattgatgatttc
aattctgatatctacacttttctccatccaaccaaagatcctgaatatccacaatttatt
gctagcttttatcaacagttaaaagagagtggtcttgctaaaataagtacgcgcaaggct
ccttgttgcaagacaacaggcaatgttctttacggctcatcgatcgaagggttgtgtcca
aactgtcgcgaattaaccggaggaaatggttgcgaaaattgcggacattacaacgatgct
tgggatcttattgatgcaaaatcaactattggtgaaggcgatattgagtttgttgatgtt
gctcgaacttatattgatttagaagaatatcgctcatttttagaatcatttatcaacagc
atttctatgcctgaagttatgcgcgctttttatcgtgattatttagacaccaaattacca
gtagtatctttatctcaaccagcttcttggggaattaaagctcctaatgaagatgggaat
gttatttatgagtggtgcgaaatggcaggaggttatttgtatctgttagagaaaatcaac
aaacaaaatgcggaaattgatttttcagcgatgaaagtaaacctcacttttggttttgat
aatgcttttttttacggattactaattcctgttcttttgaaaaatagcaatgtgaatttc
caagcatttttgacaaattactttcttcatttagatggagaaaaattttcaactagccgt
aatcatgctatttggggagaggatatgttgcgtaaattaagtcccgaccctttacgtttg
tatttatcactaataagatcggagttatccactaccgatttccaaatgacacactttaaa
tctttttttacaaaccttaaaaaatgggaagagttacttgaaattataaatagccaaatc
actaatttaccttttgtattcagtggtaataaaagtatgtctgcaacagaagaacggttt
ttattctatttcaatagaaattgttcagaggctttgtcgttttatgacgccaaaaatttt
cgcttaaacaaagtagccagatatgtagtggggattatggaagattttcacgatttttac
tacacagagtttattggtaataaaaatagtgatatatcttttttacttttggctctaaga
cgattttcggtgttattgcaaccaattatgccgagctatagtacaaagttgcaaagctct
tttcaggaaaaaaaatgtgttgttggcgaagttgaaaaatcacaaggagttgttattaaa
cattttcctacttcatttataaaagaaaatagtctgttgttgaaagaactagaaaatgaa
ctcgtatga
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