Candidatus Uabimicrobium helgolandensis: UABHE_001950
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Entry
UABHE_001950 CDS
T10824
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00550
Peptidoglycan biosynthesis
uhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
UABHE_001950 (murD)
Enzymes [BR:
uhl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
UABHE_001950 (murD)
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Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
KARI_N
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
XEY24187
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Position
complement(2704856..2706163)
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AA seq
435 aa
AA seq
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MIEQNKNIAIWGWGKEGIAAARFLQKRNINFTLLNDEDPETHSFLENVKDVVVGKEIQQK
IKDFDVVIKSPGVSLYRKEIQQNKNRVHFTSVTNLWFELYGSRFTTIIITGTKGKSTTAS
LFAHILRNQGFAVTLAGNIGQPLLGTPLDSNFYVIELSSYQAADLKYSASINILLNLYPE
HLDWHKSVAKYFHDKTSIFRLNGTNIVNADCMSENTAYSNIYNTKDSYHATVEGIFHGKN
RIISCDEISLEGVHNYTNICAIFTAFSFLNLPVEKIKTPLKTFTPLEHRLQKIETPQGIY
VSDSISTTPESTIAAIETFSNYRVTLILGGQDRGLDWKGFAKKLQNLNLHFIITTYQSGK
KIYDFLQKLGYKNTTYIDELGSAILLANKVNTPSGIILFSPAAPSYDAFTNYKEKGDFFV
HQVKANEDTLKKNDH
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacaaaataaaaatattgctatttggggttggggtaaggaaggtattgctgcg
gcaagatttttacaaaagcgcaatattaattttacattgttaaacgatgaggacccagaa
acccattcatttttagaaaatgtaaaagatgttgttgttggtaaagaaatacagcaaaaa
attaaagatttcgatgtagtaataaaatcacctggtgttagtttataccgaaaagaaata
caacaaaataaaaatcgagttcattttacttcggtgacaaatctctggtttgagttatat
ggaagtcgttttacaactattattattactggaacaaaaggtaaaagtactaccgcttct
ttgtttgcccacatactgcgtaatcaaggatttgcagttacactggcgggcaatattggg
caacctcttcttggaactccactagacagtaatttctatgttatagagctttctagctat
caagcagctgacttaaagtatagtgctagtatcaatatacttttgaatctttatccagaa
catcttgactggcacaaaagtgtcgcaaaatattttcacgataaaactagtatatttcgc
ttgaatggtactaacatcgttaatgctgactgtatgagtgagaatacagcatattcaaat
atttacaatactaaagattcttatcacgcaacagttgaaggaatttttcatggcaaaaat
agaattatctcttgtgatgaaatatcgttagaaggagttcataactatacaaatatttgc
gctatattcaccgctttttcatttttaaacttgcctgtagaaaaaattaaaacaccgcta
aaaacgtttactcctctagaacaccgcttacaaaaaatagaaacaccacaaggaatctat
gttagcgatagtatatccacaacacccgaatcgacaattgcagctatagaaacattctca
aattacagagtgactcttattctgggagggcaagatcgtgggcttgattggaagggattt
gcgaaaaaattacaaaatctcaatttacattttattataacgacttaccaaagtggcaaa
aaaatctatgattttttacaaaaacttggttataaaaatacaacgtatatagatgaattg
ggcagtgcaattttactagctaacaaagtcaatacgcctagcggaattattttattttct
ccagcagctccaagctatgacgcttttactaactacaaagagaaaggcgatttttttgtt
catcaagtaaaagctaacgaagacactctcaagaagaatgatcactaa
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