Candidatus Uabimicrobium helgolandensis: UABHE_002586
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Entry
UABHE_002586 CDS
T10824
Symbol
polX
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
KO
K02347
DNA polymerase (family X)
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
DNA polymerase
UABHE_002586 (polX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
HHH_8
PHP
HHH_5
RNase_P_p30
HHH_2
DNA_pol_B_palm
HRDC
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XEY24798
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Position
complement(3541070..3542785)
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AA seq
571 aa
AA seq
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MQKEQVISTLKHIATLMELKGENSFKIRAFHNACRALEAETESLDIIVKENRLTNIKGIG
EGIAKKIVEMVVDNKSTWLEDLQNEVPKDLVKMLGIPGLGSKKIRTMYKELGISTLQDLK
QACLDSKIEVLPKFGKKIQENILSGIETLNKHAGKYLFSFAHIESQKIMAYMRECNCIDK
LEIAGSLRRRKEITKDIDMLVVASDSETVMQHFVSYPQVEKIIGHGQKKSSIQLRKGLQV
DLRVVEEHQFAFALMYFTGSKEHNTQMRSIAKKRGLKLNEYGLFNDKEESSTCSSEEDVF
LSLGLQYVIPELRENLGEIELAQKNELPQLISQQDLKGIFHMHTEYSDGKNTVREMAEKA
QEMGYKYIGITDHSQSLTVAGGMKPNEVKKQFAEIDALNEEFDSFRIFKGVESDILADGS
LDYDEDLLAQFDFIIGSIHGNFKMSEAEMTKRVITAIENPYLTMIGHPTGRLLLKREPYA
INMTEVIHAAAENNVVVEINAHPFRLDLDWRWGKLAAEKNLLTSINPDSHIAEGFDDIYY
GIGIARKAWFNAERVINTWKIEQVEKFFAKK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagaacaagtcattagtactttaaaacacattgcaactttgatggagctcaaa
ggtgaaaatagttttaaaatacgtgcttttcacaacgcttgtcgcgcacttgaagcagaa
acggaaagtcttgatattattgtaaaagaaaatcgtttaactaatatcaaaggaataggc
gaaggcattgccaaaaaaattgtagaaatggtggtagataacaaaagtacatggctggaa
gatttacaaaatgaagtccctaaagacttagtaaaaatgctaggtattccaggactagga
tcaaaaaaaatacgcactatgtataaagagcttggaatatcaactttacaagatctcaag
caagcttgtcttgatagtaaaatcgaggttttacctaaatttggtaagaaaattcaagaa
aatattctttctggaattgaaacactaaataaacatgctgggaaatatttgtttagtttt
gctcatattgaaagccaaaaaattatggcttatatgcgtgagtgtaattgcattgataaa
ttagagattgctggtagcttacgacgtagaaaagaaattactaaagatatcgatatgcta
gttgtggcttctgattctgaaacagtgatgcaacattttgtgtcatatccacaggtcgag
aagattattggtcatggacaaaagaagtcaagtattcagttacgtaaaggtttacaggtt
gatctacgtgttgttgaagaacatcagtttgcatttgcgttaatgtattttactggtagt
aaagaacacaacacacaaatgcgtagtattgcaaaaaaacgcggattaaaacttaatgaa
tatggcttgtttaatgacaaagaagaaagttctacgtgtagtagtgaagaagatgttttt
ttatctctaggtttgcagtatgtgataccagaacttcgtgaaaacttaggagaaatagag
cttgcccaaaaaaatgagttaccacagctcatttcgcaacaagatttaaaaggtattttc
catatgcacacagaatatagtgatggcaagaatactgttcgcgaaatggctgaaaaagct
caagaaatgggatataagtacataggtattacagatcatagtcaatcactaactgtagca
ggtggaatgaagcctaatgaagtaaagaagcaatttgccgaaattgatgctttgaatgaa
gagttcgattctttccgtatttttaaaggtgttgaatcagatattcttgctgacggaagt
cttgattacgatgaagatttgcttgctcagtttgattttattatcggttctatccatgga
aactttaaaatgagtgaagctgaaatgacgaaaagagtaatcaccgctatagagaatcca
tatttgacgatgataggtcatcctacaggacgtttgttactcaagcgagaaccgtatgca
ataaatatgacagaagtaattcatgctgccgcagaaaataatgttgttgttgaaataaac
gctcatccttttcgtttggatttagattggcgttggggaaaattagccgctgaaaaaaat
ctattgacaagtatcaatcctgattctcatattgccgaaggttttgacgatatatattac
ggaattggcattgctcgcaaagcatggttcaatgcagaaagagtaataaatacttggaaa
atagagcaagtcgaaaagttttttgcaaaaaaataa
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