Candidatus Uabimicrobium helgolandensis: UABHE_002743
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Entry
UABHE_002743 CDS
T10824
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00240
Pyrimidine metabolism
uhl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
UABHE_002743
Enzymes [BR:
uhl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
UABHE_002743
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
NANM
DUF5889
Motif
Other DBs
NCBI-ProteinID:
XEY24947
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All DBs
Position
3772240..3773166
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AA seq
308 aa
AA seq
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MIEYSKEVANAFEVGIPIVALESTIISFGMPYPQNLAVAKQIESTIRSLGAVPATIAVIN
GKIKIGLQEEELLTLATSKNIIKASTKDLPYLLATQKNGATTVASTAYCAQMANIRVFAT
GGIGGVHRGVNETFDVSADLLEIKNNSLAVVCAGMKSILDIEKTIERLETLSILAIGYKC
DTWPLFYSSDSNYHILRTNSTVEIAKIMDYKWNKLDQPGGIIIANPIEKNQEISYTLIDK
YIREIAKQAAEKKISGKKITPFFLQEIVNKTQGKSLKANISLVLNNAKLAAEIAKQYAIT
KNHFAKKI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatattccaaagaagtagcaaacgcttttgaagtcggaataccaatagttgca
ctggagtccactattatttcttttggtatgccttatcctcaaaatttagcagtggctaag
caaattgagagtactattcgttcgctaggagcagtaccagcgacaattgcagtaataaat
ggtaaaattaaaataggtttgcaagaagaagagctccttaccttagcaacatcaaaaaat
attatcaaagcaagtactaaagatttaccttatttattagctacccaaaaaaatggtgca
acaacagtagcaagtacagcttattgtgcacaaatggcaaatattcgcgtatttgcaaca
ggaggaattggcggagttcatcgtggggtcaacgaaacttttgatgtctccgctgattta
cttgaaataaaaaacaatagcttagcagtcgtttgcgctggaatgaaatccattctcgac
atagaaaaaaccattgaacgcttagaaacacttagtatacttgctattggatacaaatgc
gatacttggccactattttatagtagtgatagtaattaccacattttacgcactaatagt
acagttgaaatcgcaaaaattatggactataaatggaataaattagatcaacctggtggt
atcataatcgccaaccctattgagaaaaaccaagaaatatcttacacacttatcgacaaa
tatatccgcgaaattgcaaagcaagcagcagaaaaaaaaatctcaggtaaaaagattaca
cccttttttctacaggaaattgtaaataaaacccaaggtaaaagtctaaaagctaatatt
tctttagttttgaataacgccaagttagcagctgaaattgccaaacagtatgcgattaca
aaaaatcactttgcaaaaaagatatag
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