Candidatus Uabimicrobium helgolandensis: UABHE_002925
Help
Entry
UABHE_002925 CDS
T10824
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_002925
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
UABHE_002925
Transfer RNA biogenesis [BR:
uhl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
UABHE_002925
Prokaryotic type
UABHE_002925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
XEY25117
LinkDB
All DBs
Position
complement(4025797..4026714)
Genome browser
AA seq
305 aa
AA seq
DB search
MSLSHEIMKNICGYSRAKYSTWFYYRPDHILFDVGEGISLALRNMIYGIDRIFISHNHGD
HIGGLPGFIKSRASSMGDITKPLTIYYPKGDTYILQFKDYLDLSIPKLPFVLTWQGISPG
DQVQLHANRFVEAFASDHMGTLSLGYKIIEVRKRLKAEHQGLPQNDLITIIKEQGREAIH
EEYQKNLLVYSGDTMPLDTSIVQKAEVLLHDATFVLENDREEKTHATIQEACQLAIEAEV
ASLALFHFSSRYSHQQVKDKIQQMITENNIQFPIHYIYPHFYPADFKQIYVESQKGEKKE
NNDQS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttctcacgaaattatgaaaaacatctgcggatattcgcgcgcaaaatattct
acttggttttattatcgtccagatcatatactttttgatgttggagaaggtattagcctt
gctcttcgtaatatgatttacggaattgatcgtatatttatttctcataatcatggggat
catatcggtggattacctgggttcataaaatcaagagcctcatcaatgggtgacattaca
aaacctctcacaatatattacccaaaaggtgacacttatatcttgcagttcaaagactac
cttgatctatctattcccaaacttccctttgtattaacttggcaaggtatatcaccagga
gaccaagtacaactacacgcaaatcgttttgtagaagcttttgcctctgatcacatggga
actttgtcattaggatataaaattatagaagtaagaaaacgtttaaaagcagagcaccaa
ggtttgcctcaaaacgatctaattactataatcaaagaacaaggccgcgaagctatccat
gaagaataccaaaaaaatcttttagtttacagtggagacacaatgcctttagatacttct
atagtacaaaaagcagaagtactccttcacgacgctacttttgtattggaaaatgatcgc
gaggaaaaaacgcatgcaacaatacaagaagcttgtcaactagcaatagaagcagaggta
gcttctttggcgttatttcatttctcatctcgctattcccatcaacaagtaaaagacaag
atccaacagatgataacagaaaataacattcaatttccaatacactatatctatccgcat
ttctaccctgctgatttcaaacaaatctacgtagaaagtcaaaagggagaaaaaaaggaa
aacaatgatcaatcttaa
DBGET
integrated database retrieval system
