Candidatus Uabimicrobium helgolandensis: UABHE_002996
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Entry
UABHE_002996 CDS
T10824
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00061
Fatty acid biosynthesis
uhl00071
Fatty acid degradation
uhl01100
Metabolic pathways
uhl01212
Fatty acid metabolism
uhl02024
Quorum sensing
uhl04146
Peroxisome
Module
uhl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
UABHE_002996
00071 Fatty acid degradation
UABHE_002996
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
UABHE_002996
09145 Cellular community - prokaryotes
02024 Quorum sensing
UABHE_002996
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
uhl01004
]
UABHE_002996
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
uhl04147
]
UABHE_002996
Enzymes [BR:
uhl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
UABHE_002996
Lipid biosynthesis proteins [BR:
uhl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
UABHE_002996
Exosome [BR:
uhl04147
]
Exosomal proteins
Exosomal proteins of breast milk
UABHE_002996
Exosomal proteins of breast cancer cells
UABHE_002996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
XEY25185
LinkDB
All DBs
Position
4134263..4135819
Genome browser
AA seq
518 aa
AA seq
DB search
MLNIAHLLHTSTMRYPDKVAVRFGEQKYTYKYLSELSGKVAFFLEKHGIKKGDKVALSCP
NVPYFPIVYYGILQAGAVVVPHNVLLKAPEIEYLLNDSEAKAYFAFEGTAELPMGKMAWE
GAQNTLCRTFVLMTADPTASSPIEGATTIGEVFATSESKKEIICTETSDTAVILYTSGTT
GQPKGAELTHFNIFMNTQISRDLVANATAHEDVFMMVLPLFHSFGQVVGMNATIYRGAEL
VMLPRFDPQISLDLMYKHKVNIFAGVPTMYWALLNTAGKIPAEQLQEIKSNMKICASGGA
ALPVEIHQKFKEVFDVDILEGYGLSETSPVASFHHQNRPLKVGSIGEPVWGVEMKIFNED
DEEVPVNEVGEIVIRGHNIMKGYYRRDHETEKAMRGGWFHSGDMGKVDEDGYFYVVDRLK
DMIVRGGFNVYPREIEEVLLQHPAVSLVAVIGVPHEQHGEEVKAFTVLHEGANVTNDELV
LWCKEKMAAYKYPRIIETCSDLPMNATGKVLKRELRDK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatattgctcatctactacatacttcaactatgcgttaccccgataaagtggcg
gttcgttttggcgaacaaaaatatacttataaatatcttagcgaactttctggtaaagta
gcattttttttagagaagcatggtataaaaaaaggcgacaaagtcgctctttcatgccct
aatgttccttactttccgattgtgtattatggaattttgcaagccggggctgtggtagtg
ccacataacgtattgcttaaagctccagaaatagaatacttgttgaatgatagtgaagca
aaagcttactttgcttttgaaggaactgcagagttacctatgggaaaaatggcttgggaa
ggtgcgcaaaatactttatgtcgtacttttgttcttatgacagctgacccaactgcctct
tctccgatagaaggagctactactattggagaggtatttgcgactagcgaaagcaaaaaa
gaaatcatttgtacagaaacaagtgatacagcggtaattctttatacatcgggaacaaca
ggacagcctaaaggtgcagagttaactcattttaatatttttatgaatactcaaattagt
cgcgacctcgtagcgaatgctactgcccacgaagatgtatttatgatggttttacctctg
tttcattcgtttggtcaagttgttgggatgaatgcaactatttatcgcggtgcagaactt
gtgatgttaccgcgttttgatccgcagatttcattggatcttatgtataagcataaagtc
aatatttttgctggcgttcctactatgtactgggctttacttaatacggcaggaaaaatc
ccagcagagcagcttcaagaaataaaaagcaatatgaaaatatgtgcttctggtggtgca
gcgcttcctgttgaaatacatcaaaaatttaaagaagttttcgatgtcgacatactagag
ggttatggtctttctgaaacaagtcctgtggctagttttcatcatcaaaatcgtccattg
aaagttggttctatcggtgagccagtatggggcgttgagatgaaaatattcaacgaagat
gatgaagaagttcctgtgaatgaggtcggagagattgtcattcgtggccataatatcatg
aaaggttattatcgtcgcgaccacgaaacggaaaaagcgatgcgcggcggatggttccac
tctggtgatatggggaaagtagatgaagatggttatttttatgtagttgatcgtttgaaa
gatatgattgttcgcggtgggtttaatgtgtacccaagagaaatagaggaagtactttta
caacatcctgcggtttctttggtggcggttataggtgttcctcacgaacagcacggagaa
gaagtaaaagcatttactgtattacacgaaggcgctaatgttacaaatgacgaactcgtt
ctttggtgtaaagaaaaaatggctgcctataagtatccgcgtattattgaaacttgtagt
gatcttccaatgaatgcaactggtaaagtgcttaagcgcgaactacgagataaataa
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