Candidatus Uabimicrobium helgolandensis: UABHE_003054
Help
Entry
UABHE_003054 CDS
T10824
Name
(GenBank) secretin N-terminal domain-containing protein
KO
K02453
general secretion pathway protein D
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03070
Bacterial secretion system
Brite
Secretion system [BR:
uhl02044
]
Type II secretion system
General secretion pathway protein
UABHE_003054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
type_II_gspD_N0
DUF6705
Motif
Other DBs
NCBI-ProteinID:
XEY25241
LinkDB
All DBs
Position
4211428..4213443
Genome browser
AA seq
671 aa
AA seq
DB search
MKQLIIIFFFTLFSVAIAAQEDKYQVKFENESLDSFLQKVSKITGREIIIYSKDLKNKKI
NIASTQAITKETLYSFFLSVMEFNGYIVQSVGQGDSQILKIRRATSGTSIPTTTVFTKEE
LQKYQDQDIFLTMVIELKHISAREVQTSLRALRIINPRGGNLGGINSSNTILITDFAPNV
KRVYDVIQLLDQPGASKELRVVRLKNNNAQEVATQLSELTSGNKRTNSRIAPQLDQAKLA
ADPRSNSIIIKAYPAKVKQLVALIKNLDSQVIKEPSAFHYVRIKNIDAQVLQETLAKLVE
QEKNDETSVAIETDTQNNALIVQSDEKMWSQISAIIKAADVRSPQVQVKAALVEVSPSDL
LGLGIELFYAENSEDGKTTIGGGSNFGFTNLVAVNGNTAVPINPNQALTAQKFGKLPLVP
SRDPFQRSGTFFANYDDLFTLPLLLNAIQTQTDVRVVSLPSVVVNDNSVAQIKVANSQPS
LATKIDDSGAFIDSFGDFQEAGTTLLVTPHISSEKNYLHLDISQTVEAFDQASLATGGVQ
AKTARQIVSTISIPSGHTVAVGGLEFDRNVMTVEKIPLLGDLPLIGFLFQTRVVTHQRQN
VFLFVTAKILDDEGFEDYKKMSHEVKLETSKFGVDMELIDESFKRYQKKYGLTEEEPEPR
YMLEYQSPNKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacttattataattttcttttttactctattttctgttgctattgcagcacaa
gaggacaaatatcaggttaagtttgaaaacgagagccttgattcgtttttgcaaaaagtt
agcaaaattactggtcgtgaaattattatttatagtaaagatttaaaaaacaaaaaaatt
aatattgcatccacacaagcaattaccaaagagactttgtatagtttttttctatcggta
atggaattcaatggttatatcgtacagagtgtagggcaaggagattctcagatactcaag
attcgtcgagcaacctctggaacttctataccgacgacaacggtatttactaaagaagaa
ctacaaaagtaccaagaccaagatattttcttaactatggttatagaattaaagcatatt
tcggctcgcgaagtacaaacttcgctacgcgctctacgtataataaatcctagaggagga
aatctgggaggtattaacagttcaaatacaattttaattactgattttgcgccaaatgtt
aaacgagtttatgatgtgattcaactactggatcagcctggtgcgagcaaagagttacgt
gtagttcgtttaaaaaataacaatgcccaagaagtagcaactcagttgagcgaacttact
tctggaaacaaaagaacgaattcgcgaatagcacctcaactagatcaggcaaagctagcc
gccgatccacgatcaaactctattataatcaaagcttatcctgctaaagtaaagcaactt
gttgcacttattaaaaacttggattctcaggtaataaaggaaccatccgcatttcattac
gtacgcattaaaaatattgatgcccaagtattacaagaaactttagcaaagttagtagag
caagaaaaaaatgacgaaacctctgttgcgattgaaacggacacacaaaataatgctctt
atcgtacagtcagatgaaaagatgtggtcgcaaatatcagcaattataaaagctgcagat
gtgcgtagtccacaagtgcaagtgaaagccgctttggtagaagtgagccctagtgattta
ctaggattaggtattgaacttttttatgctgaaaattcagaggatggtaaaacgacaatt
ggtgggggatcaaactttggttttaccaatcttgttgctgttaatggtaacactgctgtt
cctatcaatccgaatcaggcacttaccgcacagaagtttggaaaacttccccttgttcct
tcacgcgatccttttcaacgttcgggaactttttttgcgaattacgatgatttatttact
ttacctcttttactgaatgccattcaaacccaaacagatgttcgcgttgtgtcgcttcca
agtgttgttgtcaatgataatagtgttgcgcaaataaaagtagcaaattcacaaccttct
ttggcgacaaagatagatgattcgggggctttcattgattcttttggtgatttccaagag
gcagggacaacattacttgtaactcctcatattagtagtgagaaaaactatctacatctt
gatattagtcaaacggtggaagcttttgaccaagcatctttggctacaggtggtgtacaa
gcaaaaacagcgcgacaaattgtttcgacaattagcattccgagcggacatactgttgct
gttggtggattagaatttgatcgcaatgtgatgactgttgaaaaaattcctttacttgga
gatttgcctcttatcggctttttattccaaacacgtgttgttactcatcaacgccaaaat
gtctttctatttgttacagctaaaattctggacgatgaaggctttgaagattataaaaag
atgtcccacgaagtaaagctggaaacgagtaagtttggtgttgacatggaattaattgac
gaatcttttaaacgctatcaaaaaaaatatgggcttacagaagaagaaccagagccgaga
tatatgcttgaataccaaagtccaaataaaaagtaa
DBGET
integrated database retrieval system
