Candidatus Uabimicrobium helgolandensis: UABHE_003166
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Entry
UABHE_003166 CDS
T10824
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00100
Steroid biosynthesis
uhl00909
Sesquiterpenoid and triterpenoid biosynthesis
uhl01100
Metabolic pathways
uhl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
UABHE_003166
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
UABHE_003166
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
uhl01006
]
UABHE_003166
Enzymes [BR:
uhl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
UABHE_003166
Prenyltransferases [BR:
uhl01006
]
Terpene biosynthesis
Squalene/phytoene synthase
UABHE_003166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
XEY25346
LinkDB
All DBs
Position
complement(4344508..4345602)
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AA seq
364 aa
AA seq
DB search
MDFNTLEQHLQQNKEVDKYVFCKLIFPQVSRTFAVNVVRLPQPLQFEVLIAYLLCRIADT
IEDNADLPAIRKKELLDDFSKLVTVANWQESIYSKFEKDCRKEVLGNEVDITLLHYSLYV
LQCFWEFSETVRSNIRKWVNEMTKGMGEYSARKLQKSSVTFLQSVEDLETYCYYVAGTVG
HLLNGLFANHYSCISKKKYAFMEKKATSFGLGLQLTNIIKDSVVDYQRGWCYLPGDLLAE
LSLTDGNLLKKSSRENAYKLMNTIIERAKSHLDNALLYSCALPKRALKARVFCFLPLMMA
IKTLEQATANEQLFDKDNPVKISRNEVIAIVKYTRLNVWSNFRMAQWYRRVEKSLMAKLA
KSYS
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtggactttaacaccctggaacaacacttgcaacaaaataaagaagtggataaatacgtt
ttttgcaagctcattttccctcaagtttcacgaacatttgctgtaaatgttgttcgtctt
ccgcaacctctacaatttgaagttctcattgcgtatttactgtgccgtatagctgacact
attgaagacaacgccgacttgccagcaatacgaaaaaaagaattactagatgacttctcc
aaactagttacagtagctaactggcaagagtctatctattctaaattcgagaaagattgt
cgcaaagaggtactcggaaatgaagtagatataacactactgcactattcactgtatgtt
ttgcagtgtttttgggaattctcagaaactgtgcgcagtaatattcgaaaatgggtaaat
gagatgactaagggaatgggggagtactcagcgcgaaaattgcaaaaaagctctgtcaca
tttctgcaatcagtagaagatttagaaacatactgttactatgtcgcagggactgtagga
catcttctcaatggtttgtttgccaatcattactcgtgtatatcaaagaaaaaatatgct
tttatggaaaaaaaagccacttcttttggtctaggattacagctgacaaatattatcaaa
gattcagttgtagattatcaacgaggatggtgttatttacctggagatcttttagcagag
ttatcattaactgatggaaatttactcaagaagtcatcccgcgaaaatgcttataaatta
atgaataccatcatagagcgtgcaaaatcgcacctggataatgctttgctttactcttgt
gctctaccaaagcgagcattaaaggcgcgcgttttttgttttctaccactaatgatggcc
atcaaaaccttagagcaagcaacagcaaacgaacaactatttgacaaagataatcctgta
aaaatatcgagaaatgaagttattgctatcgtaaaatacacgcgtctcaatgtttggtct
aattttcgaatggctcagtggtataggcgtgtagaaaaatcactcatggcgaaacttgca
aagagttattcatga
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