Candidatus Uabimicrobium helgolandensis: UABHE_003302
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Entry
UABHE_003302 CDS
T10824
Name
(GenBank) methylated-DNA--[protein]-cysteine S-methyltransferase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UABHE_003302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_003302
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
UABHE_003302
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UABHE_003302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_binding_1
HhH-GPD
DUF3613
Motif
Other DBs
NCBI-ProteinID:
XEY25475
LinkDB
All DBs
Position
complement(4531102..4532220)
Genome browser
AA seq
372 aa
AA seq
DB search
MLNYTFDTEIGKMTISWEKDKIQLISLPERGMRNSKSKPPKWVKESAQQIQKHLQGKYCD
FENIPLDFSSFTEFQKLVYDGCQNIAVGSTMSYGELAEIIGRPRAARAVGTALGKNLFPI
VIPCHRVLASGRKIGGFSAEGTISTKYRILEIEKAKVNNVPSKIPEWLNAMEILANKDKK
LGKSMRKIGTFHLEKSSAHSIFESLAMSIVFQQLAGAAARAIWQRFCQLFPREIPTAKKL
IRISDEVLRSVGLSRNKMLAIRDLAQKTSNKEITTDIKQLANMSDKEIIKDLTQVRGIGN
WTVQMLLMFFLQRLDVFPEDDYGISKGFAVLYELKNLPKPKEMREAAKKWQPYRTIASWY
LWRLADLEKEKT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctaaactatacattcgatactgaaattggaaaaatgaccatttcatgggaaaaagat
aaaatccaacttatttctttaccagaacgtggtatgagaaactcgaaaagcaaacctccc
aaatgggtaaaagagtctgcgcaacaaattcaaaaacatctacagggaaagtattgtgat
tttgaaaacatacctctagatttctctagctttaccgaatttcaaaaactcgtatacgat
ggatgtcaaaatatcgctgttggcagtacaatgagctatggggaattggcagaaataata
ggaagacctagagctgcaagagctgtagggactgctttaggaaaaaatcttttccctata
gtcattccttgccatagagtattagcttcaggaaggaaaataggtggcttttctgctgaa
ggaactatatctacaaaatatcgtatactagagattgaaaaagccaaagtaaataatgtt
ccttcaaaaatacctgagtggctgaacgccatggaaatactagccaacaaagataaaaaa
ctaggtaaatcgatgcgcaagattggtacttttcatctagaaaaatcttccgcacattct
atttttgaatcacttgcaatgtctattgtttttcaacaactagcaggagcagcggcgcga
gctatttggcaacgattttgtcaattatttcctcgcgaaattccaacagcaaaaaaatta
atacgtatatctgatgaagttctacgttctgtcggactttcgcgtaataaaatgctcgcc
attcgcgatttagcccaaaaaacatctaacaaagaaattaccactgacataaaacagctc
gccaatatgagcgacaaagagataataaaagatttaacccaagttcgtggaattggaaac
tggacagtgcaaatgttactaatgttttttttacagcgcctagatgtttttcctgaagat
gattatggtattagtaaaggttttgcggttctctatgaactaaaaaacttacctaaacca
aaagaaatgagagaagcagctaaaaagtggcaaccataccgtacaatcgcatcttggtat
ctatggcgtctagcggatttagaaaaagaaaaaacgtaa
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