Candidatus Uabimicrobium helgolandensis: UABHE_003468
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Entry
UABHE_003468 CDS
T10824
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00521
Streptomycin biosynthesis
uhl00523
Polyketide sugar unit biosynthesis
uhl00541
Biosynthesis of various nucleotide sugars
uhl01100
Metabolic pathways
uhl01110
Biosynthesis of secondary metabolites
uhl01250
Biosynthesis of nucleotide sugars
Module
uhl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UABHE_003468 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
UABHE_003468 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
UABHE_003468 (rfbC)
Enzymes [BR:
uhl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
UABHE_003468 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
XEY25637
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Position
4777505..4778038
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AA seq
177 aa
AA seq
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MNFTIEELQLSGVLLIKSKAFHDKRGYFQEIFKDSVMEKIGLKFVQCNYSFSPKNVIRGL
HYQQQPFSQGKMLIPLQGHIQDVVVDLRTKSPTFGQHLCVELQDLSAMLFIPEGFAHGFA
VVSEHAAVMYMCTKEYQPSAECGIKFDDPDLNIPWKPQTPIVSSKDNSLPSWRELNF
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaactttacgatagaagagttgcaattgtcaggtgttttgctaataaagagtaaagcg
tttcacgataaaagaggttattttcaggaaatttttaaagatagtgtaatggagaaaata
gggttaaaatttgttcagtgtaactattctttttccccgaaaaatgttatacgtggttta
cattatcagcaacaacctttttctcaaggaaaaatgttgatacctcttcaaggacatatt
caagatgttgttgttgatttgcgtacaaagtctccgacttttggacagcatctttgtgta
gaactacaagacttatctgcaatgctatttattcctgaaggttttgctcacggttttgcc
gtagtttcagagcatgctgctgttatgtatatgtgcacaaaagaataccaacctagcgct
gaatgtggaatcaagtttgatgatccggatctcaatattccctggaaaccacaaactcct
attgtctcatcaaaagacaattctctaccgtcttggagagaactgaatttctag
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