Candidatus Uabimicrobium helgolandensis: UABHE_004034
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Entry
UABHE_004034 CDS
T10824
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl02024
Quorum sensing
uhl03060
Protein export
uhl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
UABHE_004034 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
UABHE_004034 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UABHE_004034 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
uhl02044
]
UABHE_004034 (ffh)
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
UABHE_004034 (ffh)
Secretion system [BR:
uhl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
UABHE_004034 (ffh)
Eukaryotic Sec-SRP protein
UABHE_004034 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
CLP1_P
AAA_22
AAA_31
6PF2K
ResIII
AAA_16
AAA_30
AAA_33
ATP_bind_1
AAA_19
APS_kinase
AAA_18
Zeta_toxin
Thymidylate_kin
DUF2100
AAA_17
Motif
Other DBs
NCBI-ProteinID:
XEY26181
LinkDB
All DBs
Position
complement(5504366..5505820)
Genome browser
AA seq
484 aa
AA seq
DB search
MFKTLSNKFDDIKNKFFSSGKISEKNIQEGIEEIEKALINADVNFRVVKGLVKRVKEKAI
GEELIKSITPSQLFIKIVNDELVELMKTDEQGLEITKDFTIIMMVGLQGSGKTTTCGKLA
RYLIKKGHRPFLVGADTQRPAAIEQLKVLGKALGEEISQETGSEFEVPVYSEPQDPPPKI
CKDSISLAKENNCDVLILDTAGRLHIDDALMKELLSIRKKTKPDHVFFVMDSMTGQNAFD
SAKAFDEQINIDGVVLTKLDSDAKGGAALSIKEVTGKSIKFIGVGEKLDALEEFHADRMA
SRILGMGDVVSLVKKAEEVMDEEKAEEMYQKMVDASFTMHDLLEQFQMIKKMGNLRDLMG
MLPGGLGVQMQNADIDESIFSRIEAIIHSMTPQERETPDMINGSRKLRMSKGSGTKVQEV
NQLLNQFREMRKMMQNMSKSGMFGNMMSGMGMGGGLGDLGNMMPGLGGGSKQRSRRKKKK
RKKK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagactctttccaacaaatttgacgatataaaaaataagtttttctcctcaggt
aagattagtgaaaaaaatatccaagagggtattgaggaaatagaaaaagctctgattaat
gctgatgttaactttcgagttgtcaaaggcttagttaaaagagtaaaagaaaaagctatt
ggtgaagagctaataaaaagcattaccccttcacaattattcatcaaaatagtgaatgat
gaactcgttgaattaatgaaaactgatgagcaaggtcttgaaattacaaaagactttaca
attatcatgatggttggtttacaaggaagtggtaaaacaactacttgtggtaagctagca
agatatctcatcaaaaaaggacatcgaccttttcttgtcggggcagatacgcaaagacct
gctgctatcgaacaacttaaagtacttggaaaagctctcggggaagaaatttcacaagaa
acaggaagcgagtttgaagttcctgtctacagtgagcctcaagatccaccacctaaaatt
tgcaaagactccatttctttagcaaaagagaacaactgcgatgttttgattctcgacact
gctgggcgtcttcatattgatgatgctttgatgaaagagcttctaagtattcgcaagaaa
acaaaacctgaccacgttttctttgttatggactcgatgacagggcaaaatgcctttgac
tctgcaaaagcatttgatgagcaaattaacattgatggtgttgttctcactaaacttgat
agtgatgccaaaggtggagctgcactttcgatcaaagaagttacaggtaaatcaatcaag
tttattggtgttggtgaaaaactagatgcactagaagagtttcacgctgaccgtatggca
agccgtattctcggtatgggtgacgttgtttcgctggtaaaaaaagcggaagaagtcatg
gatgaagaaaaagccgaggaaatgtaccaaaagatggtggacgcctcttttaccatgcac
gatttgctagaacaattccaaatgatcaagaaaatgggaaatttacgagacttaatggga
atgctccctggaggacttggagttcaaatgcaaaatgccgatatcgatgaatcgatattt
tcgcgcatagaagcaatcatacactctatgactccacaagaacgcgaaacacctgatatg
ataaacggaagtcgcaaactccgtatgtcgaaaggtagcggaacaaaagttcaagaagta
aaccaattgctcaatcaatttcgcgagatgcggaaaatgatgcaaaacatgagcaaaagc
ggtatgtttggaaatatgatgtcgggtatgggaatgggcggtggtcttggtgaccttggc
aacatgatgcctggtcttggtggcggctctaaacaacgttcacgacgcaaaaagaaaaag
agaaaaaagaaataa
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