KEGG   Candidatus Uabimicrobium helgolandensis: UABHE_004064
Entry
UABHE_004064      CDS       T10824                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
uhl  Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:uhl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:uhl02048]
    UABHE_004064
Enzymes [BR:uhl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     UABHE_004064
Prokaryotic defense system [BR:uhl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   UABHE_004064
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII T1RH-like_C LZ_Tnp_IS66
Other DBs
NCBI-ProteinID: XEY26209
LinkDB
Position
complement(5538359..5540440)
AA seq 693 aa
MVLLGKWILENKPHARIVVITDRDELDKQIEKVFKDAKQQIYRSSSGNDLIAKLHNPKFR
LICSLVHKFGRKDVKNFERFIKQLKQQPPIVAGDLFVFVDECHRTQSGKLHRTMKAMLPQ
STFIGFTGTPLLQEDKKTSMEVFGKYIHTYKFHEGVADGIILDLVYEARDIDQIITSHSS
IDSWFDRKTRALNDFQRAQLRQRWATIQKVLSSRSRMERIVDDIVLDFATKTRLSSDSGN
AILVASSIYEACRYHELFLQTTLAAQCAIVTSYNPSAKDIKTEDSGSETERQFMYDHYRK
ILNGKSTENHEDEAKRKFCNEPQNMKLLIVVSKLLTGFDAPSCTYLYIDKNMRDHGLFQA
ICRVNRLDGEDKDFGYIVDYKNLFASVQDAMFVYTSPLDCENFEREDIDIMLQDGLQANR
ENLEVARNAIFLLCEPISSPTSEDYRHYFCGNPEIAEDLKETEVRRSALYQHVVTLTRAY
VNIADSITEAGYSNTQIEEIKQEVDFYVKVRAEIRAVSGKTLDLRAYEADMRHLIDNYIS
ASEPRPISNFGGMSLLEIITIANISAAIDSLPPSIHGDNNAIAETIENNIRRCIINESAT
DPVFFDRISRLLIEIINQRRENAIAHEEYLQRIAQLARQVQTRNSENIPRSLTTAGQRAL
FNNLERNEQLAIEIDSAVKKVKKDDWRGNQAKE
NT seq 2082 nt   +upstreamnt  +downstreamnt
atggtgcttcttggtaaatggattcttgaaaacaagccgcatgcacgcattgttgttatt
accgaccgcgatgagctcgacaagcaaattgaaaaagtcttcaaagacgcgaagcagcaa
atttaccgctcttctagtggcaatgatttaatcgccaaactgcacaaccctaaatttcgc
ttgatatgctcgcttgtgcataaatttggacgcaaggatgttaaaaactttgaacgtttt
attaaacagctcaaacaacaaccgcctatcgttgccggagatttatttgtgtttgtcgat
gagtgccaccgcacccaaagcggaaaacttcatcgcaccatgaaggcgatgttgccgcaa
tctacctttatcggttttaccggaactccgttgttgcaagaagataaaaaaacaagcatg
gaggtttttggcaaatacatccacacctataaatttcacgaaggtgttgccgatgggatt
attctcgatcttgtttatgaggcaagagatatcgatcaaatcatcacttcgcatagttct
atcgatagctggtttgatcgaaaaaccagagcgctcaacgatttccagagagcacaattg
cgacaacgttgggcaacaatacaaaaggtgctcagcagtcgctcgcgtatggagagaatc
gtcgacgacattgttctcgactttgcgacaaagacacggcttagttctgacagtggcaat
gctatactagtagcgtcgtctatttacgaagcttgtcgttatcatgagttattcttacaa
acaactctcgccgcgcagtgtgcgattgttacctcttacaatccaagtgccaaagacatt
aaaacagaagacagtggcagtgagacagaacgacaatttatgtatgatcattaccgcaaa
attttaaatggcaaatccacagaaaaccatgaagatgaagccaaacgaaaattttgcaat
gaaccacaaaacatgaaattactaattgtagtgtctaaactactcaccggttttgatgca
cctagctgcacttatttgtatatcgataagaatatgcgcgaccacggtttatttcaggcg
atttgtcgcgtaaatcgtttagatggcgaagacaaggattttggctatattgtcgactat
aaaaatttgtttgcttctgtgcaagacgcgatgttcgtttatacctcgccgctagattgc
gagaattttgagcgcgaggacattgacattatgctccaagatggtttgcaagcaaaccgt
gaaaacttagaagtcgctcgcaatgcgatatttcttctgtgcgagccaatttcatcacca
acaagcgaagactatcgccactacttttgcggaaatcccgaaatcgctgaagatttgaaa
gaaacagaggtgaggcgcagcgctttgtaccaacatgtggtaactttaacgcgtgcatat
gtaaacatcgcggattctatcaccgaagcaggttatagtaatacccaaatagaagaaata
aaacaagaggtcgatttttatgtaaaagtacgcgcagagattcgcgcagtaagtggcaaa
accttggaccttcgcgcttatgaagccgacatgcgtcacttgattgacaattacatatcg
gcatccgaaccgcggcctatttccaattttggcggaatgtcattgcttgagatcattacc
atcgcaaatatttccgcagcaatagacagtttgccaccaagcattcacggagataataac
gccattgccgagaccatcgaaaacaatattaggcgctgcattatcaatgaaagcgcaaca
gacccagtattttttgacagaatctcgcgcttgctaatcgagatcatcaatcaaaggcgt
gaaaatgccattgcccacgaagaatacttacagcgcatagcgcagttagcaagacaagta
caaacacgcaacagcgaaaatattccccgttcgctaacaactgcaggacaaagagcgctg
tttaacaatctagagcgcaatgaacaactagctattgaaatagacagcgccgtaaaaaaa
gtgaaaaaagacgattggcgcggtaatcaagccaaagaatga

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