Candidatus Uabimicrobium helgolandensis: UABHE_004228
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Entry
UABHE_004228 CDS
T10824
Name
(GenBank) hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl00300
Lysine biosynthesis
uhl00470
D-Amino acid metabolism
uhl01100
Metabolic pathways
uhl01110
Biosynthesis of secondary metabolites
uhl01120
Microbial metabolism in diverse environments
uhl01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UABHE_004228
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UABHE_004228
Enzymes [BR:
uhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
UABHE_004228
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
XEY26365
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All DBs
Position
5771924..5773186
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AA seq
420 aa
AA seq
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MENQLPNWIAYHNDELYLDKFKARDLVEEFETPLMVYSQNRLKQNAISIQNAFSNCDPRS
MIYYAYKACYYKEVTNTFAENNIGAEVMSPMEYQLAINSGFVGNKIIVNGLGKTEPEITQ
ALQNDVFLINVDSMDDLILVNKIASKIHKKVNIGVRVYPSITDSHFSRTPGKLGLHIKSG
DAKRVILAAKKMPFVSLVALHVHTYSLQTNPTLHQKVAESVAEFASQLAQQEDIYFKYID
IGGGLNSRYLIERSGWNIKDFAKNLVPIVSSIAGNPTAIVEPGTFLVNDAAVVLTKVICE
KINNGKRWLVVDAGVNVLNPSPFAYYEIHPALREEHDNDHFGIVDGLCSPVSIQKKAILP
RTITKGSILAILNCGGYTLSSARSWGYPLFPVVFTTKDKAKLLVTKERVLKLQNMMHGII
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaactaccaaactggatagcttaccataacgacgaattgtacctagataaa
tttaaagctagagacttagttgaggaatttgaaactccacttatggtatactcacagaat
cggctcaaacaaaatgcaatctcaattcaaaatgcattcagcaactgcgatccacgatca
atgatttactacgcatataaagcttgttactacaaagaggttaccaatacatttgccgaa
aataatataggtgctgaagttatgtctcctatggaatatcagctagctatcaatagtgga
tttgtgggaaacaaaatcattgttaatggacttggtaaaaccgagcccgaaataactcaa
gcgctacaaaacgatgttttccttattaatgtagattcaatggacgacctaattctagta
aataagattgcctccaaaatacataagaaagttaatattggcgttcgcgtttacccttct
atcacagactctcacttttcccgtacacccggaaaattggggttacatataaagtccggc
gatgcaaaaagagttatacttgctgctaaaaaaatgccttttgtttcacttgtggctctt
catgtgcatacatattcgctgcaaacaaaccccactttacatcaaaaagtagcagaatcc
gttgcggaatttgcttcacagttggcacaacaagaagatatatattttaaatatattgat
attggaggggggttaaattctcgttatttgatcgaacgtagtggctggaatataaaagat
tttgcaaaaaatttagtacccatagtaagcagtatagcgggaaatccaacagcgattgtt
gaacctggcacatttttagtgaatgacgctgcggtggtattaactaaagttatttgcgaa
aaaataaataatggtaagcgatggttagttgtggatgcaggagtaaacgttttgaatccc
tctccctttgcatactatgaaattcatccagctttgcgagaagaacacgacaacgatcat
tttggaattgtcgatggtttatgttctcctgtaagtattcaaaaaaaagcgatcctgcca
cgtaccataacaaaaggcagtattcttgctatcttaaattgcggtggttacactctttcc
tctgcaagaagttggggatatcctctttttcctgttgttttcacaactaaagataaagcg
aaattgttagttacaaaagagcgtgttttaaaattacaaaatatgatgcatgggattata
taa
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