Candidatus Uabimicrobium helgolandensis: UABHE_005078
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Entry
UABHE_005078 CDS
T10824
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uhl03032
]
UABHE_005078
03036 Chromosome and associated proteins [BR:
uhl03036
]
UABHE_005078
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_005078
DNA replication proteins [BR:
uhl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UABHE_005078
Chromosome and associated proteins [BR:
uhl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
UABHE_005078
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
UABHE_005078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF515
Motif
Other DBs
NCBI-ProteinID:
XEY27171
LinkDB
All DBs
Position
complement(6884879..6885169)
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AA seq
96 aa
AA seq
DB search
MATVTKKQLVERISVETKQTKVGTKDTIQRFLDCITEELEKGNRIELRDFGVFQVKERAS
RVGRNPRTGDTVKVPSRNVVTFKVGRKMKLNVGSSS
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtgacgaaaaaacagctggttgagagaatttctgttgaaaccaagcaaaca
aaagtaggtaccaaagatacgattcaacgatttctagactgcattactgaggaattagaa
aaaggaaatagaatcgaattgcgagattttggcgtattccaagtaaaggaacgtgcttct
agagtgggaagaaacccaagaacaggtgacaccgtaaaagtcccttctagaaatgttgtt
acttttaaagttggacgcaaaatgaagctaaatgttggtagtagtagttaa
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