Candidatus Uabimicrobium helgolandensis: UABHE_005198
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Entry
UABHE_005198 CDS
T10824
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UABHE_005198 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_005198 (xseB)
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
UABHE_005198 (xseB)
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
UABHE_005198 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
GMIP-like_FCH
YwqH-like
Motif
Other DBs
NCBI-ProteinID:
XEY27287
LinkDB
All DBs
Position
7055594..7055827
Genome browser
AA seq
77 aa
AA seq
DB search
MNEKETFETSIKRLEQIVGELERGDLPLEESLAKYEEGIERLRRCHSMLEDTKKKIVMLT
KNPDGSLKEDDFEGKKH
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaagaaacttttgaaacttctatcaagcgtttagaacaaatagttggtgaa
ctggaaagaggagacttaccgctagaagaatcccttgcaaaatatgaagaaggaatagaa
cgattgcgaagatgtcactcgatgcttgaagataccaaaaaaaagatcgtaatgttaaca
aaaaatcccgacggatcattaaaagaagatgattttgaaggcaaaaaacattaa
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