Candidatus Uabimicrobium helgolandensis: UABHE_005526
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Entry
UABHE_005526 CDS
T10824
Name
(GenBank) tRNA-dihydrouridine synthase
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_005526
Transfer RNA biogenesis [BR:
uhl03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
UABHE_005526
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Dus
TMP-TENI
His_biosynth
BKACE
NMO
Motif
Other DBs
NCBI-ProteinID:
XEY27597
LinkDB
All DBs
Position
complement(7532938..7533909)
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AA seq
323 aa
AA seq
DB search
MKIYLAPMEGVVDSIMRDLLTSIGGFDYCVTEFLRITNTLYPNHVFFRHCPELRTQSKTP
SGTPVLFQLLGSDIACLSDNAVRAVNLGAFGIDLNFGCPAKTVNRHDGGATLLKSPSRVF
DVVYGVRKAVPDNINVSAKIRLGFEDKTLAIENAIATEEGGASMLIVHARTKKEGYKPPA
HWDWIRKIKEAVNIPVVANGDIWNIEDYLRCLDVTQCTDVMIGRGALSMPDLALQIKSIR
ANEEFYSYLWPRVCKTVMKMFENCWEHDHRGKYPVCRTKQWLKMLSRTYKEAQELFENIK
IIREADLVYDIIKENTGDTLVQR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttatttagctcccatggaaggtgttgttgactcaatcatgagagacttgctc
acatccatagggggatttgattattgtgttactgagttcttgcgaattacaaatacactg
tatccaaatcatgttttttttcgtcattgtccagagctgcgaacccaaagtaaaactcct
tctggaactccagtattatttcaactattaggaagtgatattgcttgcctaagtgataat
gctgttcgcgctgtaaatctcggagcgtttggtattgatttaaactttggatgccctgca
aaaacagtaaatcgtcacgatggaggggctacattgttaaagagtcccagccgcgttttt
gatgtggtttacggggttcgaaaagcagtacctgataacatcaatgtaagtgcaaaaatt
cgcttgggatttgaagataaaaccttggcaatagaaaatgcaatcgcaacagaagaaggc
ggagcatcgatgttaattgtacacgctcgaacaaaaaaggaaggttataaaccacctgct
cattgggattggatacgcaaaatcaaagaagctgtaaatattccagtggttgccaatggc
gatatttggaatattgaagattaccttcgttgtcttgatgttacgcagtgcactgatgtt
atgatagggcgcggagctctttctatgcctgatttagctttacagattaagtcaatacgc
gcaaacgaagaattttatagctatttatggccaagggtttgtaaaacagtgatgaagatg
tttgaaaattgttgggaacatgatcatcgcggtaaatatcctgtatgtcgtactaaacag
tggctaaaaatgctttcacgtacatacaaagaagcccaagaactatttgaaaatataaaa
attatacgcgaggccgatttggtatatgatataataaaagaaaacactggggacactttg
gtacagcgttga
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