Candidatus Uabimicrobium helgolandensis: UABHE_005570
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Entry
UABHE_005570 CDS
T10824
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Pathway
uhl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UABHE_005570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uhl03400
]
UABHE_005570
Enzymes [BR:
uhl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
UABHE_005570
DNA repair and recombination proteins [BR:
uhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
UABHE_005570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
XEY27640
LinkDB
All DBs
Position
7588039..7588794
Genome browser
AA seq
251 aa
AA seq
DB search
MKILSWNVNGLRAAIKNGFYSVITQQSPDVICLQEIKLSSIDQVTLELDDYPHRYWNLAQ
KKGYSGTAIFSKKKPISIINDIGIEEHDQEGRVITCEFEDYYLVTVYTPNAQRKLTRLDY
RQTWDADFLKYLKTLEKKKPVVFCGDLNVAHKEIDLARPKTNTKNAGFTPEERSGINNIL
EAGFVDTFRLFTEEGDHYTWWSYQSQARERNVGWRIDYFLASQSLTPRIKEAKIWQQAMG
SDHCPVSLIIE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattatcatggaatgtcaatgggttacgagcagcgatcaaaaatgggttttac
tcagtgattactcaacaaagccctgatgtcatttgtttacaagaaatcaagttaagttct
attgatcaagtcactcttgaattggatgattatccgcatcgttattggaatctagcgcaa
aaaaagggctattctggaacggctatttttagcaaaaaaaagcctatatctatcataaat
gatatagggatagaggagcacgaccaagaaggcagggtaattacctgtgaatttgaagac
tattacctagttaccgtgtatacaccaaacgcacagcgaaaattaacgcgtttggattat
cgccaaacttgggacgctgactttctcaaatacctaaaaaccttagagaagaaaaaacca
gtagtgttttgcggtgatttaaacgtagctcataaagagatagatctagcacgaccaaaa
accaataccaaaaatgcaggttttacacctgaagaacgcagtggcattaataatatcctc
gaagcaggatttgtagacactttccgactattcacagaggaaggtgatcattacacgtgg
tggagttaccagagccaagcgcgcgaaagaaatgtaggctggcgcattgattattttctc
gcctctcaaagccttacccctcgaatcaaagaagccaaaatatggcaacaagcgatggga
tcggatcattgccctgtttctttgatcattgaataa
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