Candidatus Uabimicrobium helgolandensis: UABHE_006781
Help
Entry
UABHE_006781 CDS
T10824
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
uhl Candidatus Uabimicrobium helgolandensis
Brite
KEGG Orthology (KO) [BR:
uhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uhl03016
]
UABHE_006781 (truA)
Enzymes [BR:
uhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
UABHE_006781 (truA)
Transfer RNA biogenesis [BR:
uhl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UABHE_006781 (truA)
Prokaryotic type
UABHE_006781 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
G-gamma
PMI_typeI_hel
Motif
Other DBs
NCBI-ProteinID:
XEY28803
LinkDB
All DBs
Position
9216141..9216935
Genome browser
AA seq
264 aa
AA seq
DB search
MRYFFHIGYCGANYRGWQRQPKSITVQEVIEQSLRKIFGRYVVCMGCGRTDALVHADQYF
FHSDLSENWNYDLIYRLNKVLPDDIVVFDIFPVAQKAHAQLSATCRTYQYYIHTTKDPFL
SRVSSLYLGKNLHLDLAAQACEILTKYSDYATFCKSPQKHNHTFCSVYHSQLEVNEQQNR
IRFTISANRFLRSMIRIIVVRILAVAKKELSLAEFEDYFLTNKSSQFTTIAYPQGLHLAK
IEYPFLDIPPQLLRSKELWIDVEK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtatttttttcatattgggtattgtggtgcaaattatcgtggctggcagcgccaa
cctaaatctattactgttcaagaagttatagaacagtcactaagaaaaatttttggacgc
tatgttgtttgtatgggatgtggacgtacggacgctcttgttcatgctgatcaatatttt
tttcacagtgatctctctgaaaattggaattacgatttaatatatcgtttaaataaagtt
ttgcccgatgatatagttgtttttgatatttttcctgtagcacaaaaagcacatgcccaa
cttagcgcgacttgtcgaacataccaatattatattcatacgacaaaagacccattttta
agtcgcgtgagctctttgtatttagggaaaaatttacatttggaccttgcagctcaagcg
tgtgaaatccttactaaatatagtgattacgctactttttgcaaatctcctcaaaaacac
aaccacactttttgtagtgtgtatcactctcaattagaggtaaatgaacaacaaaatcgc
attcgttttactataagtgcaaatcgttttttacgtagcatgattcgtatcattgtggtg
cgtattcttgctgtagctaaaaaggaactatctttagccgaatttgaagattattttctg
accaacaaaagtagccaattcacaaccattgcttatcctcaaggactacatcttgctaaa
atagaatatcctttcttagatattccaccacaattacttagaagtaaagaactgtggatt
gatgttgagaagtga
DBGET
integrated database retrieval system
