Urbifossiella limnaea: ETAA1_00940
Help
Entry
ETAA1_00940 CDS
T07028
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
uli
Urbifossiella limnaea
Pathway
uli02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ETAA1_00940 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uli03021
]
ETAA1_00940 (sigA_1)
Transcription machinery [BR:
uli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ETAA1_00940 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QDU18211
UniProt:
A0A517XL21
LinkDB
All DBs
Position
102230..103891
Genome browser
AA seq
553 aa
AA seq
DB search
MDWKADETLLALIKRGKESGSLTFDEVNQALPELSEPERLAEVQELLEQYGISLIDEADT
EEADENPAAVTAELLAEAELAPAFEDSDGDGRHIDDPVRMYLTQMGEIPLLTRDKEIALA
RKIEVTRRRFRRKVLECDYAMRQVVETLKRVMSGDLPFDRTIKVSQTENLEKDKILQRMP
HNLRTLEPLMEHNVEDFQRMTDDRTESAEREGLRERLRLRRRKTVTLVEELSIRTQKVQP
LMKKMEQIGGRMTELEEGVTALRGNRAAREEKANLEKELQDLQLITLEEPASLRKRVAVM
KQRFLEYEQAKRELSGGNLRLVVSIAKKYRNRGLSFLDLIQEGNTGLMRAVDKYEHRRGF
KFSTYATWWIRQAITRAIADQARTIRIPVHMIETMSRLRNVSKALLQQLGREPTIEETAK
AANITYEECKRVLKISRQPISLDRPVGESEDSYFGDFIEDDSVESPVSAAANEMLKDKIE
GVLKTLTYREREIIKLRYGLGDGYTYTLEEVGRIFKVTRERVRQIEAKAVRKLQHPVRSR
QLEGFLDAARQRG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggactggaaagcggacgagacgctcctggcgctcatcaagcgcggcaaggagtccggc
tcgctcaccttcgacgaggtgaaccaggcgctgccggaactctcggagcccgagcggctc
gccgaggtccaggagctcctcgagcagtacggcatcagcctcatcgacgaggccgacacc
gaggaggccgacgagaacccggccgccgtcaccgccgagctgctggccgaggccgagctc
gcccccgccttcgaggactccgacggcgacggccgccacatcgacgaccccgtccgcatg
tacctcacccagatgggtgagattcccctgctgacccgcgacaaggaaatcgccctcgcc
cgcaagatcgaggtgacccgccgccgcttccgccgcaaggtgctggagtgcgactacgcc
atgcggcaggtggtcgagacgctcaagcgcgtcatgtccggcgacctgccgttcgaccgc
accatcaaggtgagccagaccgagaacctggagaaggacaagatcctccagcggatgccg
cacaacctgcggacgctggagccgctgatggagcacaacgtcgaggacttccagcggatg
accgacgaccgcaccgagagtgcggagcgcgaggggctgcgcgagcggctgcggctgcgg
cggcggaagaccgtcacgctcgtcgaggagctgtcgatccggacgcagaaggtccagccg
ctgatgaagaaaatggagcagatcggcgggcggatgacggagctggaggagggcgtgacg
gcgctgcgcggcaaccgcgccgcccgcgaggagaaggccaacctggagaaggagctgcaa
gacttgcagctcatcaccctggaggagccggcgagcctgcggaagcgcgtggccgtgatg
aagcagcggttcctggagtacgagcaggcgaagcgtgaactgtcgggcggcaacctgcgg
ctggtcgtgagcatcgccaagaagtaccgcaaccgcgggctgtcgttcctcgacctgatc
caggaaggcaacacgggcctgatgcgggcggtggacaagtacgagcaccgccgcggcttc
aagttcagcacgtacgccacgtggtggatccggcaggcgatcacgcgggcgatcgccgac
caggcgcggacgatccgcattcccgtccacatgatcgagacgatgtcgcggctgcggaac
gtgtcgaaggcgctgctgcagcagctcggccgcgagccgacgatcgaggagacggcgaag
gcggcgaacatcacgtacgaggagtgcaagcgggtcctgaagatcagccggcagccgatc
agcctggaccggccggtgggggagagcgaggactcgtacttcggcgacttcatcgaggac
gactcggtggagagcccggtgagcgccgcggcgaacgagatgctgaaggacaagatcgag
ggcgtgctgaagacgctgacgtaccgcgagcgcgagatcatcaagctccgctacggtctg
ggcgacggctacacgtacaccctcgaagaggtcggccgcatcttcaaggtgacgcgggag
cgggtgcgccagatcgaggcgaaggcggtgcggaagctccagcacccggtgcgcagccgg
cagttggaaggcttcctcgacgcggcccgccagcggggctga
DBGET
integrated database retrieval system
