Urbifossiella limnaea: ETAA1_02620
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Entry
ETAA1_02620 CDS
T07028
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
uli
Urbifossiella limnaea
Pathway
uli03030
DNA replication
uli03430
Mismatch repair
uli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETAA1_02620 (dnaE)
03430 Mismatch repair
ETAA1_02620 (dnaE)
03440 Homologous recombination
ETAA1_02620 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uli03032
]
ETAA1_02620 (dnaE)
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_02620 (dnaE)
Enzymes [BR:
uli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETAA1_02620 (dnaE)
DNA replication proteins [BR:
uli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETAA1_02620 (dnaE)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETAA1_02620 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
tRNA_anti_2
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QDU18376
UniProt:
A0A517XLN2
LinkDB
All DBs
Position
294381..297896
Genome browser
AA seq
1171 aa
AA seq
DB search
MADRKFAHLHLHTHYSLLDGFNRIPALVEQTAKLGMTALAVTDHGNLYGAIEFYTKCREK
GINPVIGYEAYLAPGARTEKKAARQGDAYSHLTLLAKNEQGFRNLIKLSSIAFLEGFYYH
PRIDREVLEAHKDGLICLSGCLAGEFNQYILADKPKEAKALAAWFARLFGKDFYVEIQNN
GIGLQDQCTPVAVEIANKLGVPLVATADAHYLCATDAEAHDVLFCINTGQKRDPRKRKYP
EERMPNPYYVRSPDDMYKLFPGFEDAVARSQEIADGVDIRLDFKKRHFPVFQPPTGMTPE
DYLRQLCVEGVRERYGDNPSDAVTARLEHELNTINKMGFASYFLIVWDFVRYARAEGIPS
TARGSGCGAIVSYVLYLSHVCPLEYDLLFERFLDPNRSEAPDIDIDFCQDRRGLVIEYVK
RKYGAESVAQIGTFGTLAAKAALKDVGRVLDVPLDRVNALCKLVPMKGAIAADLDEAMAS
PDFRREYDQDPQVKTLVDIALKLEGTNRNVGTHAAGVVIANGPITDYVPVQRPPKKGADG
SEASDVTMTTQWEMGILEKVGMLKMDFLGLRNLTVLDNCVKLIKRTRGLDVDPMAFPLDD
KATYDLLQRGDAKGVFQLESEGIRELLKRMKPDNIRDLIAVLALYRPGPLEGGMVDEYIE
CKHGRRKPAYPHPITEPILVETHGVMVYQEQVMRILNKLGGIELAQAYACIKAISKKKYD
IIDARKADFVKGCVANGLTEEKGAEIFDLIVKFGGYGFNKSHTAAYAQIGYQTAYLKTHF
TAEYMAALLSSEIDDGNKRDVMVDHIADARRLGVDVLPPDVNRGLADFTVHNNRIVFGLT
AIKGLGRGAAQEIVRAREQDGKFKDIFDFAERVDRRTVQKAAVEKMVQAGAFDAFGKRAA
LFQAIPKAYQSADEKASERKRGQKNFFDMFGDGDDGAGPAKAGTAHGLLDVPEWPDAEKL
KFEKEALDFYVSSHPLAQHDDQLKRFRTHDAAQVLKLPTGTSVLVAGMVTQFQMRTAQKS
GKRWGMFYLEDFTGQCKCILWSDEYARLKDVVVNDAVFLFEGVVEWREGGSSGDLIVKKV
LTVDEARREMTKSLLLKMPYTDDQEVLRKLDAVSLVLKRNRGQTPVYLSVRDGNGRQVQL
KVSAELAINPGTLRAEELEMLLGPGAVLFTR
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgcaagttcgcgcacctccacctccacacccactacagcctcctcgacggg
ttcaaccgcatccccgccctcgtcgaacagaccgccaagctcggcatgaccgctctggcc
gtcaccgaccacggcaacctgtacggcgcgatcgagttctacaccaagtgccgcgagaag
gggatcaaccccgtcatcggctacgaggcgtacctcgcccccggcgcccgcaccgagaag
aaggcggcgcggcagggcgacgcctacagccacctcacgctcctcgccaagaacgagcag
ggcttccgcaacctcatcaagctgtccagcatcgccttcctcgaagggttctactaccac
ccgcgcatcgaccgcgaggtgctggaggcgcacaaggacggcctcatctgcctcagcggc
tgcctcgccggcgagttcaaccagtacatcctcgccgacaagccgaaggaggcgaaggcg
ctcgcggcgtggttcgccaggctgttcggcaaggatttttacgtcgagatccagaacaac
ggcatcggcctgcaggaccagtgcacgccggtcgcggtcgagatcgccaacaagctgggc
gtgccgctcgtggccacggccgacgcgcactacctgtgcgcgaccgacgccgaggcgcac
gacgtgctgttctgcatcaacaccggccagaagcgcgacccgcgcaagcgcaagtacccc
gaagagcggatgccgaacccgtactacgtccgctcgccggacgacatgtacaagctgttc
cccgggttcgaggacgccgtcgcccgcagccaggaaatcgccgacggggtggacatccgc
ctcgacttcaagaagcgccacttcccggtgttccagccgccgacggggatgacgcccgag
gactacctgcgccagctgtgcgtcgagggcgtgagggagcggtacggcgacaacccctcc
gacgcggtgacggcccggctggaacacgagctgaacaccatcaacaagatggggttcgcc
agctacttcctcatcgtgtgggacttcgtccgctacgcgcgcgccgagggcatcccgagc
acggcccgcggctccgggtgcggggcgatcgtgtcgtacgtgctgtacctcagccacgtc
tgcccgctggagtacgacctgctgttcgagcggttcctcgacccgaaccggagcgaggcg
cccgacatcgacatcgacttctgccaggaccgccgcgggctggtgatcgagtacgtgaag
cggaagtacggcgccgagagcgtggcgcagatcggcacgttcggcacgctcgccgcgaag
gcggcgctgaaggacgtgggccgcgtgctcgacgtgccgctcgaccgggtgaacgcgctg
tgcaagctggtgccgatgaagggggccatcgccgccgacctggacgaggcgatggcgtcg
ccggacttccgccgcgagtacgaccaggacccgcaggtgaagacgctcgtcgacatcgcg
ctgaagttggagggcacgaaccgcaacgtggggacgcacgccgccggcgtggtgatcgcc
aacgggccgatcaccgactacgtgccggtgcagcggccgccgaagaagggcgccgacggg
tcggaagcgtccgacgtgacgatgacgacgcagtgggagatgggcatcctcgagaaggtc
gggatgctcaagatggacttcctgggcctccgcaacctgacggtgctggacaactgcgtg
aagctgatcaagcggacgcgcggcctcgacgtcgacccgatggcgttcccgctggacgac
aaggcgacgtacgacctgctccagcgcggcgacgcgaagggggtgttccagctcgaaagc
gagggcatccgcgagctgctgaagcggatgaagccggacaacatccgcgacctgatcgcg
gtgctggcgctgtaccgccccggcccgctggagggcgggatggtggacgagtacatcgag
tgcaagcacggccgccgcaagcccgcgtacccgcacccgatcaccgagccgatcctggtc
gagacccacggggtcatggtgtaccaggagcaggtgatgcgcatcctgaacaagctcggc
ggcatcgagctggcgcaggcgtacgcgtgcatcaaggccatctcgaagaagaagtacgac
atcatcgacgcccgcaaggccgacttcgtgaaggggtgcgtggccaacgggctgacggag
gagaagggcgcggagatcttcgacctgatcgtgaagttcggggggtacgggttcaacaag
tcacacacggccgcgtacgcgcagatcgggtaccagacggcgtacctgaagacgcacttc
accgccgagtacatggcggcgctgctgtcgtccgagatcgacgacggcaacaagcgcgac
gtgatggtcgaccacatcgccgacgcccgccggctcggcgtcgacgtgctgccgccggac
gtgaaccgcggcctcgccgactttacggttcacaacaaccgcatcgtcttcggcctcacc
gccatcaaggggctcggccgcggcgccgcccaggagatcgtccgcgcccgcgagcaggac
ggcaagttcaaggacatcttcgacttcgccgagcgcgtggaccgccgcaccgtccagaag
gccgccgtcgagaagatggtgcaggccggcgcgttcgacgccttcggcaagcgggcggcg
ctgttccaggccatcccgaaggcgtaccagtcggccgacgagaaggccagcgagcggaag
cgcgggcagaagaacttcttcgacatgttcggcgacggcgacgacggcgcggggccggcc
aaggccggcaccgcccacggcctgctcgacgtgcccgagtggccggacgccgagaagctg
aagttcgagaaggaggcgctcgacttctacgtcagcagccacccgctggcgcagcacgac
gaccagctgaagcggttccgcacccacgacgcggcgcaggtgctgaagctgccgaccggc
acgtcggtgctcgtcgccgggatggtgacgcagttccagatgcgcaccgcccagaagagc
ggcaagcggtggggcatgttctacctcgaagacttcaccggccagtgcaagtgcatcctg
tggagcgacgagtacgcgcggctgaaggacgtggtggtgaacgacgcggtgttcctgttc
gagggcgtggtggagtggcgcgagggcggcagcagcggcgacctgatcgtcaagaaggtg
ctgaccgtggacgaggcccgccgcgagatgacgaagagcctgctgctgaagatgccgtac
accgacgaccaggaagtgctgcggaagctggacgcggtgagtttggtgctgaagcggaac
cgcgggcagacgccggtgtacctgagcgtgcgcgacgggaacggccggcaggtgcagctg
aaggtgagcgccgagctggcgatcaacccgggcacgctgcgggccgaggagctggagatg
ctgctcgggccgggggcggtgctgttcacccggtag
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