Urbifossiella limnaea: ETAA1_04960
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Entry
ETAA1_04960 CDS
T07028
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
uli
Urbifossiella limnaea
Pathway
uli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAA1_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uli03021
]
ETAA1_04960
03019 Messenger RNA biogenesis [BR:
uli03019
]
ETAA1_04960
Transcription machinery [BR:
uli03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ETAA1_04960
Messenger RNA biogenesis [BR:
uli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ETAA1_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
DUF3086
Mor
AAA_16
ATPase_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDU18603
UniProt:
A0A517XM68
LinkDB
All DBs
Position
573401..574522
Genome browser
AA seq
373 aa
AA seq
DB search
MSEPRPMAQGVLELHPKGYGFLRNPARNYVPTPNDAYVSGQLISKFRLAEGVALGGPVEP
ARKGASGPRLATVEQIEGGDPATYRRRAWDELTPVDPTKWIRLETGPEPLTTRVMDLFTP
IGMGQRGLIVAPPRTGKTVLLSHIAQAVVANHPDMHLIVLLVDERPEEVTEMRRSIKGEV
VASSSDNDTVTHIRLAQLVVERAKRLVERGRDVFVLLDSLTRLARAYNKQTGSGRTMSGG
VDAKALDVPKRLFGSARAFDEGGTLTILGTALIETGSRMDDVIFQEFKGTGNMELVLNRQ
LAERRIYPAIDLGASGTRKEERLLPAEMLERITLLRRGLMSLKPQDAMEGLVKQLTKTKT
NDEFLHNVGKFVK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgcggccgatggctcaaggagttcttgagctccacccgaaggggtacggg
ttcctccggaacccggcccgcaactacgttcccacccccaacgacgcctacgtctccggg
caactcatttccaagttccgcctcgccgagggcgtcgcgctcggcggcccggtcgagccc
gcccgcaagggcgcctccggcccgcgcctcgccaccgtcgagcagatcgagggcggcgac
cccgccacgtaccgccgccgggcgtgggacgaactcacccccgtcgatcccaccaagtgg
atccgcctggagaccggcccggagccgctgacgacccgcgtgatggacctgttcacgccg
atcggcatgggccagcgcggcctcatcgtcgccccgccgcggaccggcaagacggtactc
ctctcccacatcgcgcaggcggtcgtggccaaccacccggacatgcacctgatcgtgctg
ctggtggacgagcggccggaggaagtgaccgagatgcgccgcagcatcaagggcgaggtg
gtggcgtcgagctcggacaacgacacggtcacgcacatccgcctggcgcagctggtggtg
gagcgggcgaagcggctggtggagcgcggccgcgacgtgttcgtgctgctggacagcctg
acgcggctggcgcgggcgtacaacaagcagaccggcagcgggcggacgatgagcggcggc
gtggacgcgaaggcgctggacgtgccgaagcggctgttcggcagcgcccgcgcgttcgac
gagggcggcaccctgaccatcctcggcacggcgctgatcgagaccggcagccggatggac
gacgtgatcttccaggagttcaaggggacgggcaacatggagctggtgctgaaccgccag
ctcgccgagcggcgcatctacccggcgatcgacctgggcgcctcgggcacgcgtaaggag
gagcgactgctgccggcggagatgctggagcggatcacgctcttgcggcgggggctgatg
tcgctgaagccgcaggacgcgatggaggggctggtgaagcagttgacgaagacgaagacg
aacgacgagttcttgcacaacgtcggcaagttcgtgaagtga
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