Urbifossiella limnaea: ETAA1_09690
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Entry
ETAA1_09690 CDS
T07028
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
uli
Urbifossiella limnaea
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
uli03009
]
ETAA1_09690 (rimO)
Enzymes [BR:
uli01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ETAA1_09690 (rimO)
Ribosome biogenesis [BR:
uli03009
]
Prokaryotic type
ribosomal protein modification factors
ETAA1_09690 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
FlgO
Motif
Other DBs
NCBI-ProteinID:
QDU19066
UniProt:
A0A517XNL9
LinkDB
All DBs
Position
1179961..1181391
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AA seq
476 aa
AA seq
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MSVKSLPLSAPLRTPGADAPGSGKGTFAFVSLGCPKNTVDSERMLGKLATEGYALRPDAS
GADVVVVNTCGFIESARQESLGVIREMLALKDAGKLGAVVVAGCMAERQREVLLEQVPGV
DQILGVFGREEIATVVDAVQARRRGGDADLSALDLFPPAPVRALEDTARLRITPRHFAYL
KISEGCDRLCTYCAIPKMRGKHATKPIEEVLKEARELAADGVRELIVVAQDTTYYGMDLY
GRTRLADLIRELGKVDGIEWVRVLYAYPEHFTDEVVEALATTDKVIPYLDMPLQHINDRV
LRRMVRRVDRAATEALLGRLRKNLPDLALRTTFIVGFPGETDAEYEELRRFVADFGFERL
GVFPYSPEPDTPAAKLDGHLPDDVKAARVAGVMEAQQAVAFRWAEAQVGRDHPVVIDGPD
PEFASHFRGRTYADSPDIDCAVRVKGKGLRAGDFVKVKVTAADGYDLAGRAVGKPW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaagagcctgccgctgtccgcgccgcttcgcactccgggggctgatgccccc
ggctcggggaaaggcaccttcgcgttcgtctcgttgggctgccccaagaacaccgtcgac
tccgagcggatgctcggcaagctcgccaccgagggctacgccctccgccccgacgccagc
ggcgccgatgtcgtcgtcgtgaacacgtgcgggttcatcgagtcggcgcggcaggagtcg
ctcggcgtcatccgcgagatgttggcgctgaaggacgccggcaagctcggcgccgtcgtc
gtcgccgggtgcatggccgagcggcagcgcgaggtgctgctggagcaggtgccgggcgta
gatcaaattctcggcgtgttcggccgcgaggagattgccaccgtcgtggacgcggtgcag
gcccgccgccgcggcggcgacgccgacctgtcggcgctcgacctgttcccgcccgcgccg
gtgcgggcgctggaggacacggcgcgcctgcggatcacgccgcggcacttcgcgtacctg
aagatcagcgaggggtgcgaccgcctctgcacctactgcgccatcccgaagatgcgcggc
aagcacgccaccaagccgatcgaagaagtgctgaaggaggcccgcgagctcgccgccgac
ggcgtccgcgagctcatcgtcgtggcccaggacacgacgtactacggcatggacctgtac
ggccgcacccgcctcgccgacctgatccgcgagttggggaaggtggacggcatcgagtgg
gtccgcgtgctgtacgcctaccccgagcacttcaccgacgaggtcgtggaggcgctggcg
acgacggacaaggtgatcccgtacctcgacatgccgctgcaacacatcaacgaccgcgtg
ctgcggcgcatggtccgccgcgtggaccgcgccgccaccgaggcgctgctggggcggctg
cgcaagaacctgccggacctggcgctgcggacgacgttcatcgtcggcttcccgggcgag
acggacgccgagtacgaggagctgcggcggttcgtcgccgacttcgggttcgagcggctc
ggcgtgttcccgtactcgccggagccggacacgcccgcggccaagctcgacggccacctc
cccgacgacgtgaaggcggcgcgcgtggctggcgtgatggaggcgcagcaggcggtggcc
ttccgctgggccgaggcgcaggtggggcgcgaccacccggtagtgatcgacggcccggac
ccggagttcgccagccacttccgcggccgcacctacgccgactcgccggacatcgactgc
gccgtgcgggtgaaggggaaggggctgcgggccggcgacttcgtgaaggtgaaggtgacc
gcggccgacggctacgacctggcggggcgcgcggtcgggaagccgtggtga
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