Urbifossiella limnaea: ETAA1_15430
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Entry
ETAA1_15430 CDS
T07028
Symbol
yhaM_1
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
uli
Urbifossiella limnaea
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uli03019
]
ETAA1_15430 (yhaM_1)
Messenger RNA biogenesis [BR:
uli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETAA1_15430 (yhaM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
QDU19613
UniProt:
A0A517XQ32
LinkDB
All DBs
Position
1897277..1898281
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AA seq
334 aa
AA seq
DB search
MPRRTVDQLRDGTELDDVYLVADKQLRVNRNGAPYLQLDLRDRTGGISARLWNASDAIAR
GFDPGDFVHADGKVQLFQGALQVILNSVERVEAGKVDLSDFLPQTEKSIPQLMDRLRGFL
FKLGNPHLRALAECLLMDDAFVRKFTTCPAGVKLHHAYVGGLLEHVVTMMDAADKLLPLY
PFVDRDLLLIGIFLHDAGKVRELTYARAFGYSDEGQLVGHLAIGVELLTTAALKVPDLTG
EPVPRELMLRLQHMVLSHHGTLEWGSPRVPMTPEAMLLHVIDMMDTRMHQVARELKEDKN
NPSAWTPYNHNLGRRFYKGGGNGDLLGESGGGYD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgcaccgtggaccagctccgggacggaaccgaactcgacgacgtgtacctc
gtcgccgacaagcagctccgcgtgaaccgcaacggcgccccgtacctgcagctcgacctg
cgcgaccgcaccggcggcatctcggcccggctgtggaacgcctccgacgcgatcgcccgc
ggcttcgaccccggcgacttcgtccacgccgacggcaaggtgcaactgttccagggggcg
ttgcaggtcattctcaactcggtcgagcgcgtcgaggcggggaaggtcgatctgagcgac
ttcctgccgcagacggagaagagcatcccgcagctgatggaccgcctccgcggcttcctg
ttcaagctcggcaacccgcacctgcgggcgctcgccgagtgcctcctgatggacgacgcc
ttcgtccgcaagttcacgacgtgcccggccggggtgaagctccaccacgcctacgtcggc
gggctgctggagcacgtcgtcaccatgatggacgccgccgacaagctgctgccgctgtac
ccgttcgtggaccgcgacctgctgctgatcggcatcttcctgcacgacgccggcaaggtc
cgcgaactcacctacgcccgcgccttcggctactccgacgaggggcagctggtcgggcac
ctggcgatcggcgtggaactgctcacgacggcggcgctgaaggtgccggacctgacgggc
gagccggtgccgcgggagctgatgctgcggctgcagcacatggtcctgagccaccacggc
acgctggagtgggggagcccgcgggtgccgatgacgccggaggcgatgctgctccacgtc
atcgacatgatggacacgcggatgcaccaggtggcacgggaactgaaagaggacaagaac
aacccgtcggcgtggacgccgtacaaccacaacctcgggcggcggttttacaagggcggc
ggcaacggcgacctgctcggcgagagcggcggcggctacgactga
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