Urbifossiella limnaea: ETAA1_21410
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Entry
ETAA1_21410 CDS
T07028
Symbol
rpoA_1
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
uli
Urbifossiella limnaea
Pathway
uli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ETAA1_21410 (rpoA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uli03021
]
ETAA1_21410 (rpoA_1)
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_21410 (rpoA_1)
Enzymes [BR:
uli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ETAA1_21410 (rpoA_1)
Transcription machinery [BR:
uli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ETAA1_21410 (rpoA_1)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ETAA1_21410 (rpoA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QDU20196
UniProt:
A0A517XRQ9
LinkDB
All DBs
Position
complement(2620201..2621202)
Genome browser
AA seq
333 aa
AA seq
DB search
MRVRWRGLELPNRVSADRATLTDTYGKFYIEPFERGFGMTLGNSLRRILLSSLEGSAVTR
VKIGGVQHEISTITGVVEDVTDILLNVKSLVVKNVSDQPKVVRIQKHEAGVVRGVDVQHD
ETVQIINPEHHLATLTADVPFSVEMTVENGRGYKTADENAGKEREIGVIPVDSSFSPVVR
VKYDIEETRVGQKTNYDRLVIEIWTNGTVGPQMALVEAAKILRKHLNPFVQYTEPGPEVP
LDEPIEVGGSAPRDAGDAELEKKLNMSLAELELSVRATNCLETEGITTVRELVMRAEDEL
LEVRNFGETTLREVKAKLQERGLSLGMKLPTRR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttcgctggcgcgggctggaactgcccaaccgggtctcggccgaccgggccacc
ctcaccgacacctacggcaagttctacatcgagccgttcgagcgcggcttcgggatgacg
ctggggaactccctccgccgcatcctcctgtcgagcctcgaagggtcggccgtcacgcgc
gtcaagatcggcggcgtgcagcacgagatctccaccatcaccggcgtcgtcgaggacgtg
accgacatcctcctcaacgtcaagagcctggtcgtcaagaacgtgagcgaccagccgaag
gtcgtccgcatccagaagcacgaggccggcgtcgtccgcggcgtggacgtgcagcacgac
gagacggtgcagatcatcaaccccgagcaccacctcgccacgctcaccgccgacgtgccg
ttcagcgtcgagatgacggtcgagaacggccgcgggtacaagacggccgacgagaacgcc
ggcaaggagcgcgagatcggcgtgatcccggtggacagctcgttctcgccggtcgttcgc
gtcaagtacgacatcgaggagacgcgcgtcggccagaagacgaattacgaccggctcgtg
atcgagatctggaccaacggcaccgtcggcccgcagatggcgctggtggaggccgcgaag
atcctgcggaagcacctgaacccgttcgtgcagtacaccgagccggggccggaggtgccg
ctggacgagccgatcgaggtcggcggcagcgccccgcgcgacgccggcgacgccgagctg
gagaagaagctgaacatgagcctggccgagctcgagctgtcggtccgggccacgaactgc
ttggagacggaagggatcaccaccgtccgcgagctggtgatgcgggccgaggacgagctc
ctcgaggtccgcaacttcggcgaaacgaccctccgcgaggtgaaggccaagctccaggag
cgcggcctctcgctggggatgaagctgcccacacgccgctaa
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