Urbifossiella limnaea: ETAA1_24270
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Entry
ETAA1_24270 CDS
T07028
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
uli
Urbifossiella limnaea
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uli03016
]
ETAA1_24270 (rnd)
Enzymes [BR:
uli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ETAA1_24270 (rnd)
Transfer RNA biogenesis [BR:
uli03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETAA1_24270 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QDU20475
UniProt:
A0A517XSI5
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All DBs
Position
2939477..2940736
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AA seq
419 aa
AA seq
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MRRRPSKLVTLPEHVIATPARLAAATAHLSAAPIIGFDTEFVGEDSYRPELCLVQVSSSQ
ALFVIDPFACGPLDAFWEVMTDPAKVIVVHAGREDLRICNFAAGKAPAKVYDVQVAAGLA
GLSWPIGYAGLVSELLGHRMNKGETLTDWRRRPLAAAQLRYAFDDVRFLLPAHKKLTDRL
TRDQRLEWAEEEFVTFTDKAVADDVTAERWRRVKGTGGFDPRGLAAVRELHAWRDGFAHR
VNRPARMLMRDDVLAEIARRLPKSLDDLQNLRGLPRGEQDAILSAVSRARALAADELPGV
EPKESDSPQITLMANLLGVVLTDLCSRMKLASNLVATTSDLKAVARSRACGGELPDVQLT
RGWRGRHILPELLAVLDGHHALRVVKPTSLAPLAYLPVSEPLPAADATLADGPEESAET
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgaccctccaagctcgtgaccctacccgagcacgtcatcgccacccccgcc
cgactggcggccgccacggcccacctctcggccgccccgatcatcgggttcgacaccgag
ttcgtcggcgaggactcgtaccggcccgagctgtgcctcgtgcaggtgtcgtcgtcgcag
gcgctgttcgtgatcgacccgttcgcctgcggcccgctcgacgccttctgggaggtcatg
accgaccccgcgaaggtgatcgtcgttcatgccgggcgggaagacctgcgcatctgcaac
ttcgcggccgggaaggcgccggcgaaggtgtacgacgtgcaggtcgccgccggcctcgcc
gggctgagctggcccatcggctacgccgggctcgtgtccgaactcctcggccaccgcatg
aacaagggcgagacgctgaccgactggcgccgccgcccgctggccgccgcccagctgcgg
tacgccttcgacgacgtgcgcttcctcctgccggcgcacaagaagctgaccgaccggcta
acccgcgaccagcggctggagtgggccgaggaggagttcgtcacgttcaccgacaaggcg
gtcgccgacgacgtgacggccgagcggtggcggcgcgtgaaggggaccggcgggttcgac
ccgcgcggcctcgcggcggtgcgcgagctccacgcctggcgcgacggcttcgcccaccgg
gtgaaccgcccggcccggatgctcatgcgagacgacgtgctggccgagatcgcccgccgg
ctgccgaagtcgctcgacgacctgcaaaacctccgcggcctgccgcgcggcgagcaggac
gccatcctctcggccgtgtcgcgggcgcgggcgctggccgccgacgagctgccgggcgtg
gagccgaaggagagcgattcgccgcagatcacgctcatggcgaacctcctcggcgtcgtg
ctcacggacctgtgctcgcggatgaagctggcgtcgaacctggtggccaccacgtccgac
ctgaaggccgtggcccgctcccgcgcctgcggcggcgagctgcccgacgtgcagttgacg
cggggctggcgcggccggcacatccttccggaactgctcgcggtgctggacggccatcac
gcgctgcgggtggtaaagcccacgtcgctggcaccgctcgcgtacctgcccgtgtccgag
ccgttgcccgcggcggacgccacgcttgccgacggacccgaggaatcggccgaaacctga
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