Urbifossiella limnaea: ETAA1_24610
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Entry
ETAA1_24610 CDS
T07028
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
uli
Urbifossiella limnaea
Pathway
uli03410
Base excision repair
uli03430
Mismatch repair
uli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETAA1_24610 (recJ)
03430 Mismatch repair
ETAA1_24610 (recJ)
03440 Homologous recombination
ETAA1_24610 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_24610 (recJ)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ETAA1_24610 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ETAA1_24610 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ETAA1_24610 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
PlyCA_N
Motif
Other DBs
NCBI-ProteinID:
QDU20509
UniProt:
A0A517XSM3
LinkDB
All DBs
Position
complement(2979574..2981382)
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AA seq
602 aa
AA seq
DB search
MSRVEKVWRLLPQNPDTAHRLAGSLRVSPVVAQLLLNRGVSEPDHARRFLDGSLSGLHAP
GDLPDVPGAADRLFRAIAEKRRICVYGDYDVDGVTGTAILVTLLTKLGAAVEFHVPHRLS
EGYGLNAPRLRELAASGVSVVVSVDCGIASIEEAEEARAAGLELIITDHHEMRTDAAGVP
ILPPAACLVHPRLPGSTYPFGELSGAGVALKLAWEVARRASGGAKTSPELREFLLDAVGL
AALGLVADVVPLHDENRLLVKHGLARIAEKPTIGLRALLDAAMGRPEAGKERKPVTAEDV
GFRLGPRLNAAGRLQCARMVVDLLTTTNTGKAQQIAAYLEDLNGQRQTLERKITQQAKDI
IDAGGLASAPGLVVWSPEWNEGHQGVVGIVASRLVETYGRPALVIATRTDEDIAVGSGRS
VSGFPLHLALKACEAHLVGHGGHAAAAGFKLRPANIPALRDAFAAYAAAHFHTDGPPPPR
VTLDAEVPLSAVTWGLLRDIDKLEPYGAQNPRPKFLAAGLRAESLRTMGSGEVQKHLSFR
AVQGDTSFRAVAWNMADRMEELLAANGECCLAFTPKVNDFRGQRSLELQVIDVKVGKSVQ
LG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgcgtcgagaaagtgtggaggcttctaccgcagaacccggacacggcccaccgc
ctcgccgggtcactgcgggtgtcgccggttgtcgcgcagctgctactcaaccgcggcgtg
tccgagcccgaccacgcccgccgcttcctcgacggctccctgtccggccttcacgccccc
ggcgacctgccggacgtgcccggcgccgccgaccgcctcttccgcgccatcgctgagaag
cgacgcatctgcgtctacggcgactacgacgtggacggcgtgaccggcaccgccatcctg
gtcacactcctcaccaaactcggcgccgccgtcgagttccacgtcccgcaccgcctctcg
gaggggtacggcctcaacgccccgcgactacgggagctcgcggcgtcgggcgtgtcggtg
gtcgtgtccgtggactgcggcattgccagcatcgaggaggcggaggaggcgcgggccgcc
ggactggaactgatcatcaccgaccaccacgagatgcggacggacgcggccggcgtgccg
atcctgccgccggccgcgtgcctggttcacccgcgcctccccggcagcacgtacccgttc
ggcgaactgtccggcgcgggcgtggcactgaaactggcgtgggaagtggctcgccgggcc
agcggcggcgcgaagacgagccccgagctacgcgagttcctgctggacgccgtggggctg
gccgcgctcggcctcgtcgccgacgtggtgccgctccacgacgagaaccgcctgctcgtg
aagcacggcctggcgcggatcgcggagaagcccacgatcggcctgcgggcgctcctcgac
gccgcgatgggccggcccgaggcgggcaaggagcggaaacccgtgaccgccgaggacgtg
ggcttccgactggggccgcgcctgaacgccgccggccggttgcagtgcgcccgcatggtg
gtcgacctgctcacaacgaccaacaccgggaaggcccagcagatcgccgcatacctcgaa
gacctgaacggccagcggcagacgctcgagcggaagatcacccagcaggccaaggacatc
atcgacgccggcggcctggcttccgcccccggcctggtcgtgtggtcgcccgagtggaac
gaggggcaccagggcgtggtcgggatcgtggccagccggctggtcgagacgtacggtcgg
ccggcgctggtcatcgccacccgcaccgacgaggacatcgctgtcggctcggggcggtcg
gtgtcgggcttcccgctgcacctggcgctgaaggcgtgcgaggcgcacctcgtgggccac
ggcgggcacgcggcggcggcggggttcaagctgcggccggcgaacatccccgcgctgcgc
gacgccttcgccgcctacgccgcggcccacttccacaccgacggcccgccccccccgcgc
gtcacactcgacgcggaggttcccctcagcgccgtaacctggggcctgctccgcgacatc
gacaagctcgaaccctacggggcacagaacccgcggcccaagttcctcgccgcggggctg
cgggccgagagcctgcgaacgatggggagtggtgaggtgcagaagcacctgagttttcgg
gccgtgcagggcgatacgagcttccgcgccgtggcgtggaacatggccgaccggatggag
gagttgctcgcggcaaacggcgagtgctgcctggcgttcacgccgaaggtgaacgacttc
cgcggccagcgctcgctcgagctccaggtcatcgacgtgaaggtggggaagtcggtacaa
ctcgggtag
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