Urbifossiella limnaea: ETAA1_30760
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Entry
ETAA1_30760 CDS
T07028
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
uli
Urbifossiella limnaea
Pathway
uli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAA1_30760 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uli03019
]
ETAA1_30760 (rny)
Messenger RNA biogenesis [BR:
uli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETAA1_30760 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF5662
KH_KhpA-B
dUTPase
KH_2
KH-I_KHDC4-BBP
DUF4945
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
QDU21111
UniProt:
A0A517XUB9
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All DBs
Position
complement(3677393..3678997)
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AA seq
534 aa
AA seq
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MEPELAAGLAAGAAAAGAALTYVTVRTLGRGPSLSVMEAARLQEETRQAENRARELVERG
RQEADGIVREAEARARDEAGRRRDELTRELDQARGEVRELERRAEKREDAAEQKARELAR
KERQLESVQKKLSERKERLQEKAKQLDDLATEQTRTLQQLSGMSREEAERMLLDRLDREL
AEEAAARIRQHEERIRQQAEAKAREVLATAIQRFAADHTADTTVSTVDIPSDDIKGRIIG
REGRNIRAFEKATGVDVIVDDTPGVVIVSAFDNVRRETARLALAKLIADGRIHPTRIEEV
VTETQAEMEKHVTETGRAAVIEADVPEPHEKLLHLLGRLKFRTSYSQNVLQHSLEVAHLC
GLMAGELGLNPQLARRCGLLHDVGKAADHEMEGGHPKVGAELARRYGETSKEVLHAIVGH
HDDVTVDNIYTVLVAAADAISASRPGARRESLEKYVKRLENLEAVAMGFPVVEHAYAIQA
GRELRVIANAGQTTDAEAVKLSRDIARAIEQQLDYPGEIRVTVIRETRAVEVAK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaactcgccgccgggctggccgccggagcggccgccgccggcgccgcgctc
acgtatgtcaccgtccgcaccctcggccgcggcccgtcgctgtccgtgatggaagccgcc
cgcctgcaagaggaaacgcgtcaggccgagaaccgggcgcgagagctggtcgagcggggc
cggcaggaggccgacggcatcgtccgcgaggccgaggcgcgggcgcgcgacgaggccggc
cggcgccgcgacgagctgacgcgcgagctggaccaggcccgcggcgaggtgcgcgagctg
gagcgccgcgccgagaagcgggaggacgccgcggagcagaaggcccgcgagctggcccgc
aaggagcggcaactcgaatcggtgcagaaaaagctctccgagcgcaaggagcgcctccag
gagaaggccaagcaactggacgatcttgccaccgagcagacgcgcacgcttcagcagctg
agtggcatgtcacgcgaggaggcggagcggatgctgctcgaccggctcgaccgcgagctg
gccgaggaggccgccgcccgcatccgccagcacgaggagcggatccgccagcaggccgag
gcgaaggcccgcgaggtgctcgccacggccatccagcgcttcgccgccgaccacaccgcc
gacacgaccgtgagcacggtggacatcccgtccgacgacatcaagggccgcatcatcggc
cgcgaggggcggaacatccgggccttcgagaaggccaccggcgtggacgtgatcgtggac
gacacgcccggcgtggtgatcgtgtcggcgttcgacaacgtccgccgcgagacggcccgg
ctcgccctggccaagctcatcgccgacggccgcatccacccgacgcggatcgaagaggtg
gtgaccgagacgcaggccgagatggagaagcacgtcaccgagaccggccgggccgcggtc
attgaggcggacgttcccgagccgcacgagaagctgctgcacctgctcggccgcctcaag
ttccgcacgagctacagccagaacgtcctccagcactcgctggaagtcgcccacctgtgc
ggactgatggccggcgaactcggcctgaacccgcagctggcacgtcgctgcgggttactg
cacgacgtggggaaggcagccgaccacgagatggagggcggccacccgaaggtcggcgcc
gagctcgcccgccgctacggcgagacgagcaaggaggtgctgcacgccatcgtaggccac
cacgacgacgtgacggtggacaacatttacacggtgctggtggcggccgcagacgcgatc
agcgccagccgcccgggggcgcggcgggagtcgttggaaaagtacgtgaagcggctggag
aatctggaggcggtggcgatgggtttcccggtggtcgagcacgcctacgcgatccaggcc
ggccgcgagctccgcgtcatcgccaacgccgggcaaacgacggacgccgaggcggtgaag
ctgtcgcgcgacatcgcccgcgccatcgagcagcagttggactaccccggcgagatccgc
gtgaccgtgatccgcgagacgcgggccgtcgaggtggcgaagtaa
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