KEGG   Urbifossiella limnaea: ETAA1_32040
Entry
ETAA1_32040       CDS       T07028                                 
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
  KO
K19036  ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
Organism
uli  Urbifossiella limnaea
Brite
KEGG Orthology (KO) [BR:uli00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:uli03009]
    ETAA1_32040 (recD)
   03012 Translation factors [BR:uli03012]
    ETAA1_32040 (recD)
Enzymes [BR:uli01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     ETAA1_32040 (recD)
    5.6.2.5  RNA 5'-3' helicase
     ETAA1_32040 (recD)
Ribosome biogenesis [BR:uli03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   ETAA1_32040 (recD)
Translation factors [BR:uli03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    ETAA1_32040 (recD)
SSDB
Motif
Pfam: AAA_12 AAA_11 AAA_30 AAA_19 Viral_helicase1 AAA_16 DbpA SMUBP-2_HCS1_1B AAA_22 nSTAND3 AAA_25 PhoH CbiA NPHP3_N UvrD-helicase ResIII bpMoxR MobB AAA_33 AAA SRP54 MeaB AAA_31 AAA_6 Helicase_RecD AAA_28 AAA_24 Mg_chelatase TrwB_AAD_bind Glyco_transf_4 Rad17 AAA_18 DEAD NACHT ABC_tran RNA_helicase SLFN-g3_helicase RRM_occluded NTPase_1
Other DBs
NCBI-ProteinID: QDU21239
UniProt: A0A517XUT0
LinkDB
Position
complement(3830997..3833132)
AA seq 711 aa
MTAVHFDPLPPRCSTGAVLAFVCNTTGLDRKHVGKIALIGRGATVELDDRHAAKAVAALD
GAAFNDRPVRARFAGKADFTNVDHFGKLSKFLDLEAAAEEAEARRRAAEGTDRGDGGTLL
GLVLRESEFGLGGRLLLTLGRASRTEPLPPNRLGPGSPVVLTRTKPQRGVTFRGVVYDRA
DATVGVAIEPPDYDFDDDDGWRLDLSPDEVSRLRQQDALRRAAGADGDRLAALRAVLLGE
REPEFDAGQPPPTFLTPLNEPQQDAVRLALAAKDVAVIHGPPGTGKTTTVAELIRCLVAR
GDRVLACAASNHAVDNLLEKLLRVGLHPVRLGHPARVVPELRARALDLLAEKHPDARQAR
KVAREAFALFRSADKWTRGKPEPGAKAAMRKEARDLLAEVRRLEALAVERVLDDARVVCA
TLTGLDGQTLGRRTFDTAVLDEACQSTEPASWLPLLRAGRVILAGDHCQLPPTVLSPEAA
DAGLSVSLMERVVARYGGQVARRLVVQYRMHESIQAFSSAEFYDGELIPHESVVSHRLCD
LPGVEAGPPTETPVRFIDTAGAGYDEAQEEETESRLNRQEAALAVRQVRALLAAGVPAEQ
VAVITPYRGQVRLLRELLKDYPALEVDSVDGFQGREKEAVVISLVRSNPAGEIGFLADTR
RTNVALTRARRALVVIGDSATLAADPFYARMIAHFEATGAYSSVWELDSNT
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgaccgccgtccacttcgacccgctcccgccgcggtgcagcacgggggcggtgctcgcg
ttcgtgtgcaacaccaccggcctcgaccgcaagcacgtcggcaagatcgccctgatcggc
cgcggcgccaccgtcgagctcgacgaccgccacgcggccaaggccgtggccgccctcgac
ggcgcggcgttcaacgaccgccccgtccgcgcccgcttcgccggcaaggccgacttcacg
aacgtcgaccacttcggcaagctctccaagttcctcgacctggaagccgccgcggaagaa
gcggaggcccgccgccgcgccgccgagggcaccgaccgcggcgacggcggcacgctcctg
gggctcgtgctgcgcgaatccgagttcggcctcggcgggcggctgctgctcacgctcggc
cgcgccagccgcaccgagcccctcccgccgaaccgcctcgggccgggttcgccggtcgtg
ctgacacggacgaagccgcagcgcggtgtcacgttccgcggcgtcgtctacgaccgcgcc
gacgcgacagtcggcgtggcgatcgaaccgccggactacgactttgacgacgacgacggt
tggcgcctagacctgtcgccggacgaagtttcgcggctccgccagcaagacgcgctgcgg
cgcgccgcgggcgcggatggcgaccgactcgcggcgctgcgggcggtgctactcggcgag
cgcgagcccgagttcgacgccggccagccgccgcccacgtttctcaccccgctgaacgag
ccgcagcaggacgccgttcgccttgcgctcgcggcgaaggacgtggccgtcattcacggc
ccgcccggcaccggcaagacgacgaccgttgcggaactgattcgctgcctggtcgcccgc
ggggaccgggtgttggcgtgcgccgcgagcaaccacgcggtcgataacctgctcgaaaag
ctgctgcgggtcgggctgcacccggtgcgactcggccacccggcccgcgtcgttcccgag
ttgcgcgcccgcgccctcgacctgctcgccgagaagcacccggacgcccggcaggcccgc
aaggtggcccgcgaggcgttcgcactgttccgctcggccgacaagtggacccgtggcaag
cccgaacccggggcgaaggccgcgatgcggaaggaggcccgcgacctgctggcggaagtg
cgccggctcgaagccctggccgtcgagcgcgtgctggacgacgcccgcgtcgtgtgcgcc
actctcaccggcctcgacggccagaccctcggccgccgcaccttcgacacggccgtgctc
gacgaggcgtgtcagtcgaccgagccggcgtcgtggctgccgctgctgcgggccgggcgc
gtgatcctcgccggcgaccactgccagctgccgccgacggtgctctcgccggaggccgcc
gacgccgggctgtcggtcagcctgatggagcgggtcgtggcacgatacggaggtcaggtc
gcacggcgactcgtcgtgcagtaccggatgcacgagtcgatccaggcgttttcgtcggcc
gagttctacgacggtgagttgatcccgcacgaatcggtcgtctcacaccggctgtgcgac
ctacctggtgtcgaagccgggccgccgacggagacgcccgtgcgcttcatcgacacggcc
ggggccgggtacgatgaagcacaggaagaggagacggagagccgcctgaaccgacaggag
gcggcgctcgcggtccggcaggtgcgggcgctgctggccgccggcgtgccggccgagcag
gtcgcggtcatcaccccgtaccgcgggcaggtgcggctcctgcgcgaactactgaaggac
tacccggcgctggaagtggacagcgtcgacgggttccagggccgcgagaaggaggcggtg
gtcatcagcctggtgcgctcgaacccggccggcgaaatcggcttcctggccgacacccgg
cggacgaacgtcgccctcacccgcgcccgccgtgcgctggtagttatcggcgacagcgcg
accctcgccgcggacccgttctacgcccggatgatcgcccacttcgaagcaacgggggcg
tattcgagcgtgtgggaactcgattccaatacctag

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