KEGG   Urbifossiella limnaea: ETAA1_34740
Entry
ETAA1_34740       CDS       T07028                                 
Symbol
polA_4
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
uli  Urbifossiella limnaea
Pathway
uli03030  DNA replication
uli03410  Base excision repair
uli03420  Nucleotide excision repair
uli03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:uli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ETAA1_34740 (polA_4)
   03410 Base excision repair
    ETAA1_34740 (polA_4)
   03420 Nucleotide excision repair
    ETAA1_34740 (polA_4)
   03440 Homologous recombination
    ETAA1_34740 (polA_4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:uli03032]
    ETAA1_34740 (polA_4)
   03400 DNA repair and recombination proteins [BR:uli03400]
    ETAA1_34740 (polA_4)
Enzymes [BR:uli01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ETAA1_34740 (polA_4)
DNA replication proteins [BR:uli03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ETAA1_34740 (polA_4)
DNA repair and recombination proteins [BR:uli03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ETAA1_34740 (polA_4)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ETAA1_34740 (polA_4)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 DNA_pol_lambd_f WHD_BrxR HHH_5
Other DBs
NCBI-ProteinID: QDU21507
UniProt: A0A517XVJ4
LinkDB
Position
4161418..4164306
AA seq 962 aa
MSDTPPAGSLYLLDAHGLIYQMFHGIGPMSAPDGRPTNAVFGVTRALMSLYDRGADYLIA
TWDRGGKTFREELAPEYKAHRDPPPADLTVQEPMVDQVLDAMRIPFLSADGFEADDVMAT
LASEGAARGLSVYICSSDKDLRQCLGSQVKILNLRKAEEMDAAGLMATWGVRPEQVIDFQ
ALVGDAVDNVPGVPGVGPKTAAKWLQQYPTLADVVAHADELPGGPKARAALKEAVANGNL
ERSKKLVTLDTRVPLPMEWDTWRRRDWDGQKLLELFHEFGFRGFAERVRKTMTAGGAARN
AAILEDAGLASQPTAVKAAAHAGRPKVAKPTGPSLFDAIDNDGPVVPPPPPADNWTGEYT
LIDTPVKFAGFLTDLSKQPRFVFDLETTSFEPRRADIVGYAISWEEGKAYYVPVRGPAED
QVLDPDSVLAALKPLFENPAVKKVNQNIKYDLLVLRQAGVRLAGVAGDPMVAHYLLHAGE
RSHGLDDLTRNYFGHENIPISDLIGKGKKQIGMAQVRTAKVAAYAGEDADAALRLANRLE
PEIDQGGLRTLYETLELPLIDVLAELEFNGVRLDVPFLAKLSKEMEGQLATTETDIYALA
GKPFNIGSPKQLREILFDEMKLPVQKRTDTTGEPSTDQESLERLAALGHALPTKIIEHRQ
IAKLKGTYVDALPALVNPSTGRVHTSFNQTVAATGRLSSSDPNLQNVPSRTEQGRQIRQA
FLPPDGWLILTADYSQVELRLLANFTSDDALQQAFAADKDVHAIVAAQIFNVPEAEVTKA
QRGVAKTVNFGVLYGMSGTGLAARLGISRAEADQFIDSYFDRYPKVLQYQTDLLNKARQT
GYVGTLLGRRRRFDPSAIRPRSSYQQRSTAEREAINMEIQGSAADLMKLALLGVHRRLSE
SRLRAHLLLTVHDELVLEVHPDDLRPVVDLVRTEMSGAMSLNVPLKVDVAAGPNWLDVSS
VK
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgtcggacaccccgccggcgggcagcctgtacctgctggacgcccacggcctcatctac
cagatgttccacgggatcggcccgatgtccgccccggacggccggccgacgaatgccgtt
ttcggcgtcacgcgggcgctgatgtcgctttacgaccgcggggccgactaccttatcgcc
acctgggaccgcggcggcaaaaccttccgcgaggaactggccccggagtacaaggcccac
cgcgacccaccgccggccgacctgaccgtccaggagccgatggtggatcaggtgctcgac
gcgatgcgcatcccgttcctgtcggccgacgggtttgaggccgacgacgtgatggcgacg
ctggcgtcggaaggtgcggcgcgcgggctgtcggtctacatctgctcctcggacaaggac
ctgcggcagtgtctcggttcgcaggtgaagatcctcaacctccgcaaggcggaggagatg
gatgccgccggcctgatggcgacctggggcgtgcggccggagcaggtcatcgactttcag
gcactcgtcggcgacgccgtcgacaacgtccccggcgtgcccggcgtcggccccaagacc
gcggccaagtggctgcagcagtatccgacgctggccgatgtggtggcgcacgccgacgaa
ctccccggtggcccgaaggcgcgcgcggctctgaaggaggccgtggccaacggcaacctg
gagcggtcgaagaagctcgtgacacttgacacgcgggtgccgctgccgatggagtgggac
acctggcggcgccgcgactgggacgggcagaagttgctggaattgtttcacgagttcggc
ttccgcggcttcgccgaacgtgtccgcaagacgatgaccgccggcggcgccgcccgcaac
gcggctatcctcgaagacgctggcctcgcttcacaaccgaccgctgtgaaggcagccgca
cacgccggtcgtccgaaggtggcgaagcccaccggcccgtcactgttcgatgccatcgac
aacgacggccccgtcgtgccgcccccgccgccggccgacaattggacaggcgagtacacc
ctgattgacacacccgtcaaattcgccggcttcctcacggacctgtcgaagcagccgcgg
ttcgtcttcgacctggagacgaccagcttcgaaccgcgccgtgcggacatcgtcggttac
gcaatctcgtgggaggaagggaaggcgtactacgttcccgttcgcggccccgccgaggat
caggtgctcgacccggacagcgtgctggcagcgctgaagccgctgttcgagaacccggcg
gtgaagaaggtcaaccagaacatcaagtacgacctgctcgtgctgcggcaggccggcgta
cggctcgcgggcgtcgccggcgacccgatggtcgcccactacctgctccacgccggcgag
cggagccacggtttggacgacctgacgcggaactacttcggccacgaaaacatcccgatc
agcgacctgatcggcaaggggaagaagcagatcggcatggcccaggtccgcaccgcgaag
gtggccgcttacgccggcgaggacgccgacgccgcattgcgcctggccaaccgcctcgaa
cccgagatcgatcagggcgggttgcgcaccctctacgagacgctggaactacctctgatc
gacgtgctggccgaactcgagttcaacggcgtgcggctggacgtgccgttcctggcgaag
ctgtcgaaggagatggaggggcaactggcgacgaccgagacggacatctacgcactggcc
gggaagccgttcaacatcggctcgccgaagcaactgcgggagatcctcttcgacgagatg
aagctgcccgtgcagaagcggaccgacaccacgggcgagccgagcacggatcaggagtca
ctcgaacgactcgcggccctcgggcacgcgctgccgaccaagatcatcgagcaccgccag
atcgcaaagctgaagggcacgtacgtggacgccctgccggcgctcgtgaacccgagcacc
ggccgcgtccacacctcattcaaccagacggtcgcggccacgggccggctcagctcgtcg
gacccgaacctgcaaaacgttccctcccggacggagcagggccgacagattcggcaggcg
ttcctgccaccggacgggtggctgatcctgaccgccgactactcgcaggtcgagctccgg
ctgctggcaaacttcacaagcgacgatgcactccagcaggcattcgccgcggacaaggac
gttcacgccatcgtcgcggcccagattttcaacgtgcccgaagccgaggtgacgaaggcg
cagcgcggcgtggcgaagaccgtgaatttcggcgtcctctacggaatgagcggtaccggc
cttgcggcccgcctcgggatcagccgtgccgaggcggaccagttcatcgactcgtacttc
gaccgctacccgaaggtgcttcagtaccagacggacctgttgaataaggcccggcagacg
ggctacgtcggcacgctgctgggccggcgtcggcgcttcgacccgagcgcgatccgcccg
cggtcgagctaccagcagcgctcgacggccgagcgcgaggcgatcaacatggagatccag
gggagcgccgccgacctcatgaagttagcgctcctcggcgtccaccgccggctgtccgag
agccggttgcgcgcacacctgttgctgacagtccacgacgaattggttcttgaggttcac
ccggacgacctaagaccggtggtcgatttggtgcgcacggagatgtccggggcgatgagc
ctgaacgtaccactgaaggtagacgtcgcggccggaccgaactggctagacgtttcgagt
gtcaagtaa

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