Urbifossiella limnaea: ETAA1_35630
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Entry
ETAA1_35630 CDS
T07028
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
uli
Urbifossiella limnaea
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uli03016
]
ETAA1_35630 (truB)
Enzymes [BR:
uli01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ETAA1_35630 (truB)
Transfer RNA biogenesis [BR:
uli03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAA1_35630 (truB)
Prokaryotic type
ETAA1_35630 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDU21593
UniProt:
A0A517XVQ6
LinkDB
All DBs
Position
complement(4274406..4275284)
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AA seq
292 aa
AA seq
DB search
MNGLLVIDKPGGMTSRDAVNRVQRWFPRKTKIGHTGTLDPLATGVLVVCVGAATRLADRV
QAMGKSYASRFRLGATSTTDDADGTVTETGAAPVPREAIDAALARFVGVVEQTPPAFSAM
KVDGRRAHALARAGEEVHLKARPVRIDAVRVVGFAWPWLDVEVDCGKGTYIRSIARDLGA
ALGVSGMVQTLRRTRVGPFTTEQGVGVDAPPADLPVRLRPMAEALGDTPCVTIGADELRR
FRTGQAVRFTPLRLGRQPPECAAVGVVDERGELIALGTVANGVVRPEAVFNV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcctcctcgtgatcgacaagccgggcggcatgacctcccgcgacgccgtgaac
cgcgtgcagcgctggttcccgcgcaagaccaagatcggccacaccggcaccctcgacccg
ctggcgaccggcgtgctggtggtctgcgtcggcgccgcgacccggctggccgaccgcgta
caggcgatgggcaagagctacgcctcgcgcttccgcctcggcgctactagcaccaccgac
gacgccgacggcactgtgaccgagaccggcgccgcgccagtgccacgcgaggcgatcgac
gcggcactggcgaggttcgtgggtgtggtcgagcagacgccgccggcgttctcggcgatg
aaggtggacggccggcgggcgcacgcgctcgctcgggccggcgaggaggtgcatctgaaa
gcacggccggtgcggatcgacgccgtgcgtgtggtcggcttcgcgtggccgtggctggac
gtggaggtggactgcggcaaggggacgtacatccgctcgatcgcccgcgacctcggcgcc
gcgctcggcgtcagcggcatggtgcaaacgcttcggcgcacccgagtcggcccgttcacc
acggagcagggggtgggcgtggacgcaccccccgccgacctcccggttcgactacggccg
atggcggaggcgctgggcgacacgccgtgcgtgacgatcggcgcggacgagctgcggcgc
ttccgcacgggacaggcggtgcggttcacgcccctgagactagggcgtcagcccccggag
tgcgccgcggtcggcgtcgtggatgaacgcggcgaactgatcgcgctcggcacggtcgca
aacggcgttgtgcgaccggaggcggttttcaacgtgtga
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