Urbifossiella limnaea: ETAA1_36250
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Entry
ETAA1_36250 CDS
T07028
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
uli
Urbifossiella limnaea
Pathway
uli00541
Biosynthesis of various nucleotide sugars
uli01100
Metabolic pathways
uli01250
Biosynthesis of nucleotide sugars
Module
uli_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ETAA1_36250 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
uli01005
]
ETAA1_36250 (kdsA)
Enzymes [BR:
uli01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ETAA1_36250 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
uli01005
]
Lipid A
ETAA1_36250 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
RUS6_N
Motif
Other DBs
NCBI-ProteinID:
QDU21654
UniProt:
A0A517XW07
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All DBs
Position
complement(4331956..4332804)
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AA seq
282 aa
AA seq
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MAAVQPVTVGPYTVGAGSPLLWVCGPCVIESRDFTLGVAARLKQLADRLGLQLVFKASFD
KANRSSGKSFRGVGLHDGLAILDAVRKETGLPVTTDIHEAAQAEPAAEVCEILQVPAFLA
RQTDLLEACGKTGRVVNVKKGQFMAPWDMKNVVAKLAEVGNRRVLLTERGTTFGYGLLVN
DMRSVPWMQQTGAPVIFDATHSVQTPGALGDRTGGDRTMVPVLARAAVAAGCDGVFVETH
PTPDTAPSDGPNMVPLADLETLVRSCLRIRAALADAPTGPPS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggttcagccggtgacagtcggcccctacaccgtcggcgccggcagcccgcta
ctgtgggtctgcggcccgtgtgtcatcgagagccgcgacttcaccctcggcgtcgccgcc
cgcctcaaacagctagccgaccggctcgggctgcaactcgtcttcaaggcgtcgttcgac
aaggccaaccgttcgtccggcaagtccttccgcggcgtcggccttcacgacggcctcgcg
atccttgacgccgttcggaaggaaaccggcctccccgtcaccaccgacatccacgaagcc
gcccaggccgagcccgcggccgaggtgtgcgaaatcctgcaagtccccgcgttcctcgcc
cggcagaccgacctgctggaagcgtgcggcaagaccggccgggtcgttaacgtgaagaag
gggcagttcatggccccgtgggacatgaagaacgtcgtcgccaagctggccgaggtcggc
aaccgccgcgtgctcctcaccgagcgcggcaccacgttcggctacgggctgctggtgaac
gacatgcgcagcgtgccgtggatgcagcaaaccggcgccccggtgatcttcgacgccacc
cacagcgtacagactccgggcgcactcggtgaccgcaccggcggcgaccgcacgatggtg
ccggtcctcgcccgcgccgccgtcgccgccgggtgcgacggggtgttcgtggagacgcac
ccgacgcccgacaccgcccccagcgacgggccgaacatggtcccgctcgccgacctggaa
acgctggtccgctcctgcctccgcatccgggccgcactcgccgacgcccccacgggtccg
ccttcatga
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