Urbifossiella limnaea: ETAA1_38860
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Entry
ETAA1_38860 CDS
T07028
Symbol
rpoE_5
Name
(GenBank) ECF RNA polymerase sigma-E factor
Organism
uli
Urbifossiella limnaea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QDU21913
UniProt:
A0A517XWN2
LinkDB
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Position
complement(4643123..4645018)
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AA seq
631 aa
AA seq
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MDATEFLRRQVISLAYRQLSAAELMTRASAGDVEAYIALVCLKFPVVAAVSRGVLGPVAA
VEDVAQEVFVQLWRQREGIRSADAIDGWLAQTARNLALKLVTRESQQQAVGVEWWQRRGR
VTETDLPDAAALVGELEQRLRQLIATRPGQEQQVLRAAEHAEGDAQAAASLGLSVNSYRV
RLHRARQKLRRLLEKAGLLPGLVVGATVGGARRAGAAVAALWARRLGKVFLVTCVLTAGV
AGGVAWQAQRVGPVAERHTAPVPTGGPVETLQARNLRIARDEVAGGVRDIFQKFYPPPHA
VEVSCVRAFGSEVEVELRVTPPPPAITQLAAVSRGRYCVFRRKLRVDSQPAGQTGWYRMN
SEKPIAIKLPSLSAAGREVVRGREEYAATERLFDRLPKDDRAEAEQLRQLFGPPGGEVLL
PTGGLGTSSFPDGMILSADGGGLYVRDGAGSWRYAGECPGWFPVVADGQVFCFESGVIRS
RPLAEPTAPWVRRCDEPPLGPGDRATGELFVAGGRLCMAMEPHGLNSRPLADPAAGWVRT
THPVQPSGFAVVGDSLYGKDVERLFERPAGQLDAAWVPAGPWPAGCLWLVADGTRLLAYG
RGPGPIYARPVGAAADVPWTAVGRVHDPYQR
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacggaatttctccgccggcaggtgatctcgctcgcctaccggcaattgtcg
gcggcggagttgatgacgcgcgcctccgccggcgacgtggaggcgtacatcgcgctggtc
tgcctcaaattcccggtcgtcgcggccgtcagccggggcgtgctggggccggtggcggcg
gtcgaggacgtggcccaggaagtcttcgtgcagttgtggcggcagcgggagggcatccgg
tcggccgacgccatcgacggctggctcgcacaaacggcccgcaacctggccctgaagctc
gttacccgtgagtcgcaacagcaggcggtcggggtcgagtggtggcagcggcgcgggcgg
gtgaccgagaccgatttgccggacgcggccgcactcgtgggcgaactggagcagcgactg
cgccaactcatcgccacgcggccggggcaggaacagcaggtgttgcgggcggccgagcac
gccgagggcgacgcacaggcggccgcgtcgctcgggctgagcgtgaactcctaccgcgtc
cgcctgcaccgcgcccggcagaagttgcggcggctgttggagaaggccggtctgctcccc
ggcctggtggtcggcgcgaccgtcggcggggcgcggcgggcgggagcggcggtcgcggcc
ctctgggcgcggcggctgggcaaagtcttcctcgtgacgtgtgtcctcacggcgggggtg
gccggcggtgtggcctggcaggcgcagcgggtcgggccggtcgcggaacgtcacaccgct
cccgtcccgacgggcgggccggtcgaaaccctgcaggcgcggaacctgcggatcgcacgg
gacgaggtcgccgggggcgtccgggacatcttccaaaagttctaccccccgccgcacgcc
gtcgaggtgtcctgcgtccgcgcgttcgggtcggaggtcgaagtcgaactgcgggtgacg
ccgccgcccccggcgatcacccagctcgccgccgtgtcgcgcggacgctactgtgtgttt
cggcgcaagcttcgggtggactcacagccggccgggcaaacgggctggtaccggatgaac
tcggagaagcccatcgccatcaaactcccatctctgtccgcggcggggcgggaggtcgtc
cgcgggcgagaggagtacgcggccacggagcgactgttcgaccgactcccgaaggacgac
cgggccgaggcagagcaactgcgacagctgtttggcccgccgggtggcgaggtgctgctg
cctacagggggattgggaacctcaagtttccccgacgggatgatcctgtcggccgacggc
ggcgggctgtacgtccgggacggggccggctcgtggcggtacgcaggggaatgtcccggc
tggttcccggtcgtggcagacgggcaggtcttctgcttcgagagcggggtgatccggtcc
cggccgctcgccgagccgacggcaccgtgggtgaggcggtgcgacgagccgccactcggg
ccgggcgaccgggcgaccggcgagctgttcgtcgccggcgggcggttgtgcatggccatg
gagccgcacggcctgaactcgcggccgctggccgacccggcggccgggtgggtgcggacc
acacacccggtccagccgtctggcttcgcggtcgtcggcgactcgttatacgggaaggac
gtcgagcgcctgttcgagcggcccgcgggccagctcgatgcggcatgggttccggccggc
ccgtggccggccgggtgtctttggctggtcgcggacggcactcgcctgctggcgtacggc
cgaggtccggggccgatctacgcccgcccggttggggccgccgcggacgtgccctggacg
gccgtcggccgcgtccacgacccgtaccagcggtga
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