Urbifossiella limnaea: ETAA1_42320
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Entry
ETAA1_42320 CDS
T07028
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
uli
Urbifossiella limnaea
Pathway
uli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ETAA1_42320 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_42320 (xseB)
Enzymes [BR:
uli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ETAA1_42320 (xseB)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ETAA1_42320 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
TPR_16
Use1
Motif
Other DBs
NCBI-ProteinID:
QDU22255
UniProt:
A0A517XXP6
LinkDB
All DBs
Position
complement(5083932..5084246)
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AA seq
104 aa
AA seq
DB search
MTPSDAEPVRFEQALAELDRILRELEDGTTTLDDALARYERGVALLRLCYGKLKDAEQRV
RLLNGTAADGSPDLRLFEHVATLAAATASLGKPLRGAKLPGIDG
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atgactccgagtgacgccgagcccgtccgcttcgagcaggcgctggccgaactcgaccgc
atcctccgcgagctggaggacggcaccaccaccctcgacgacgccctcgcccggtacgag
cgcggcgtcgccctgctgcggctctgctacggcaagctgaaggacgccgagcagcgcgtc
cgcctcctgaacggcaccgccgccgacggcagccccgacctccggctgttcgagcacgtc
gcgaccctcgccgcggccacggcttcgctcggtaaaccgcttcgtggtgcaaagttgccg
ggaatagacggctga
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