Urbifossiella limnaea: ETAA1_45410
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Entry
ETAA1_45410 CDS
T07028
Symbol
sigA_3
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
uli
Urbifossiella limnaea
Pathway
uli02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ETAA1_45410 (sigA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uli03021
]
ETAA1_45410 (sigA_3)
Transcription machinery [BR:
uli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ETAA1_45410 (sigA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_17
MarR_2
HTH_Tnp_4
Mor
HTH_Tnp_ISL3
HTH_36
DUF5798
Motif
Other DBs
NCBI-ProteinID:
QDU22558
UniProt:
A0A517XYL2
LinkDB
All DBs
Position
5455061..5456761
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AA seq
566 aa
AA seq
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MSAFKVSALRELTEQQTRFAPPARRQEQVGRAERLVAEIDPGKQYPYQWVCFKLTEYRSD
AHPDLLIPGPLLRHDLALFARRVERSIPAVPAEQVVEPMLTLEQVSERFRVSTKTIGRWR
LRGLTARRMKVAGRSQLGFPTAAVERFVAEHPNLVSRGAKFSHLSEGEKDEILKAARDMR
AAGLCLTEATRRIAAGLGRSTESVRTTIKSHDRAHPAHALYPAAGRLTNTDKDAIYEAKR
QMDLTRVTANHTGDTVNTLATRFGRTRSSMYRVVNEVRARELIARPVDYIDSPEFADEGR
DAEFLAEMPGKAEFDAKLLSMRPPKDVPPQMAHLYEWPLLTKDQEQHLFRKMNYLKHKLR
KLGEAVDPARARVSELRQAEQLREGVKAVRDVLINCNQRLVYNNAKKHLASGLENIDDLV
SDGNLSLMRAVEKFDYSRGNKFSTYATWAIIKNFARSIPDEKTHKQRYMTGHDEVFEAKA
DVRTDEQEVLAVADAAKARVSKLLDHLDPRTREVIRMRVGLDGSREMTLEQIGQHFGITK
ERVRQINVRGMKQLREWAAKENGDGV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccttcaaggtttcagcgctgcgagagctgacggagcaacaaacccgcttcgcc
ccgccggcacgccggcaggagcaggtgggtcgcgccgagcggctcgtcgccgagatcgac
ccgggcaagcagtacccgtaccagtgggtctgcttcaagctcaccgagtaccgctcggac
gcgcacccggacctgctcatccccggcccgttgctgcggcacgacctggccctgttcgcc
cggcgcgtcgagcggtcgatcccggcggtgccggcggagcaggtcgtcgagccgatgctc
accctcgaacaggtgagcgagcggttccgggtgtccacgaagacgatcggccggtggcgc
ctccgcgggctgaccgcccgccgcatgaaagtcgccggccgcagccagctggggtttccg
actgcggcggtggagcggttcgtcgccgagcacccgaacctcgtcagccgcggggcaaag
ttctcgcacctgagcgagggcgagaaggacgagattctgaaggcggcacgcgacatgcga
gccgccgggctgtgcctcaccgaggcgacccgacggatcgccgcgggactgggtcgctcg
acggagtcggtacggactaccatcaagagccacgaccgcgcccacccggcgcacgccctg
tacccggccgccggccggctgaccaatacggacaaggacgcgatctacgaagcgaagcgc
cagatggacctgacccgagtgacagccaaccacacaggtgataccgtgaatacccttgcc
acccgcttcggccgcacccggtcgtccatgtaccgggtggtgaacgaagtccgggcgcgc
gagctcatcgcccgccccgtggactacatcgacagccccgagttcgccgacgagggccgc
gacgccgagttcctggctgagatgcccgggaaggccgagttcgacgcgaagctgctgtcc
atgcggccgccgaaggacgtgccgccgcagatggcccacctgtacgagtggccgctgttg
acgaaggaccaggagcagcacctgttccgcaagatgaactacctgaagcacaagctccgc
aagctcggtgaggccgtggacccggcccgggcgcgcgtcagcgaactgcggcaggccgag
cagctgcgcgagggcgttaaggccgtccgcgacgtgctcatcaactgcaaccagcggctg
gtgtacaacaacgccaagaagcacctggccagcggcctggagaacatcgacgacctggtg
agcgacggcaacctgtcgctgatgcgggcggtcgagaagttcgactacagccgcggtaac
aagttcagcacgtacgcgacgtgggccatcatcaagaacttcgcccggagcattccggac
gagaagacgcacaagcagcgttacatgaccggccacgacgaggtgttcgaggcgaaggcc
gacgtgcggacggacgagcaggaggtgctggccgtggccgacgccgcgaaggcccgggtg
agcaagctgctggaccacctcgacccgcggacgcgcgaggtgatccggatgcgggtgggg
ctcgacggcagccgcgagatgacgctggagcagatcggccagcacttcggcatcacgaag
gagcgggtgcggcagattaacgtccgcgggatgaagcaactccgcgagtgggccgcgaag
gagaacggcgacggggtgtga
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