Urbifossiella limnaea: ETAA1_52080
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Entry
ETAA1_52080 CDS
T07028
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
uli
Urbifossiella limnaea
Pathway
uli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETAA1_52080 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uli03400
]
ETAA1_52080 (mutM)
Enzymes [BR:
uli01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ETAA1_52080 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ETAA1_52080 (mutM)
DNA repair and recombination proteins [BR:
uli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ETAA1_52080 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QDU23216
UniProt:
A0A517Y0C9
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All DBs
Position
6271640..6272533
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AA seq
297 aa
AA seq
DB search
MPELPEVETVVRDLRPRAVGRTVTAVRVGAKQLRKAWNVAWAADVVGRRVAAIRRRGKWI
VVEMEGPRIVVHLGMTGQFTAVAAAEPEPDHLHLVFALNDGTELRFRDVRRFGSVTLFAD
DAAVEAFFAAAGLGPEPFGLDPAAFREVVRASARNLKAILIDQTVVAGVGNIYADEACCR
AGLHPARKGDSLTPAECDALRVAVEAVLTTAIAARGSTIRDYVGGSGLGGGFQLEHRVYG
RTGEPCLTCGAAIERVVLAGRSSHYCPKCQPRDRGTEGPRDRGAGTRERPRPRLKPK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtggagaccgtggtccgcgacctccgcccccgcgcggtcggc
cgcacggtcaccgccgtccgcgtcggggcgaagcaactccgcaaggcgtggaacgtggcc
tgggcggcggacgtggtcggccggcgggtcgccgcgatccgccgccgcggcaagtggatc
gtggtcgaaatggaggggccgcgcatcgtcgtccacctcggcatgacgggtcagttcacc
gccgtcgccgcggccgaacccgagcccgaccacctgcacctcgtgttcgccctgaacgac
ggcaccgagctccgcttccgcgacgtgcgccggttcggctccgtcacgctgttcgccgac
gacgccgcggtggaagcgttcttcgccgccgccggcctcggccccgagccgttcggcctc
gacccggccgcgttccgcgaagtcgtgcgtgcttccgcgcggaacctgaaggcgatcctg
atcgaccagacggtcgtggccggcgtcggcaacatctacgcggacgaggcgtgctgccgc
gccggcctccaccccgcccgcaagggcgactcgctgacgcccgccgagtgcgacgcgctg
cgggtcgccgtcgaggccgtgctgacgaccgcgatcgccgcccgcggcagcacgatccgc
gactacgtcggcggctccggcctcggcggcggcttccagctggagcatcgcgtctacggc
cgcaccggtgagccgtgcctcacctgtggagccgcgatcgagcgcgtcgtgttggcaggc
cggtcgtcgcactactgcccgaagtgtcagccgagggaccgagggaccgagggaccgagg
gaccgaggggcaggaaccagggagcgcccccgcccccggctcaagccgaaatga
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