Mycosarcoma maydis: UMAG_00282 Help Entry UMAG_00282        CDS       T01021                                  Name (RefSeq) putative RNA helicase   KO K18664   antiviral helicase SLH1 [EC:5.6.2.6] Organism uma  Mycosarcoma maydis Brite KEGG Orthology (KO) [BR:uma00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:uma03019]     UMAG_00282 Enzymes [BR:uma01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      UMAG_00282 Messenger RNA biogenesis [BR:uma03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      UMAG_00282 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sec63 DEAD SNRNP200_wHTH ResIII Helicase_C AAA_16 AAA_7 AAA_22 nSTAND3 DEXQc_Suv3 AAA_29 Helicase_PWI HTH_61 Motif Other DBs NCBI-GeneID:  23561630 NCBI-ProteinID:  XP_011386197 UniProt:  A0A0D1E7J0 LinkDB All DBs Position 1:762662..768550 Genome browser AA seq 1962 aa AA seqDB search MTLQNHLQSFLSAASSSQRTLDADQQLIGSLQAELDTLLRSSHQQYGSHISTTDAGGIKD IWSEFYRFASINSSTEQEGQDANDLHTHEMETSAAEQADGIDYRTHQSSSPAVAGLQDHL AHLASIDPQLADSLRHTVVTALSSSRSGDEISAELAETIGFDQLDLVGSIISDRQAALSA LQADSYSSPHMSGTEELSHQEQVQIALPHRPSHHGATHDAFHRGSRPHIPGSQVVVQTQQ ERQQARRFKNDLRKANRQRIVDPSESIRTYTPEELERIREESLAAAANRPLFTGTATGVE QVRYPHVFSSGAQGNVLSVFGQRFALPLGTSREEKQFYEEVTIPPPRTVPMRTEERYIPI PEMDPICRGAFPGYKSLNRLQSAVYPLAYKTNENLLVCAPTGAGKTDVAMLTVMRAISQY ARNLEPTAGNAGQGFDIRKNDFKIIYVAPMKALAAEVVRKFSKRLQYLGIKVRELTGDMQ MTRQEIAETQMIVTTPEKWDVVTRKPTGEGELATKVRLLIIDEVHLLHDERGSVIETIVA RTLRLVESSQSLIRIVGLSATLPNYVDVADFLRVNRWQGLFYFDSSFRPVPLEQHFLGVK GKAGSQQSRANLDKACFEKVSELVQAGHQVMVFVHARKETVKTAQTLREMFREEAMGDIL QASADENPRKAFFKKELQSSRNREMKELFDTGFGIHHAGMLRTDRTLSERMFEAGVTRVL CCTATLAWGVNLPAYAVVIKGTDVYDSSAGKFVDLSILDVLQIFGRAGRPQYEDLGVGYI LTSQDRLSHYVDAITSQHPIESKFIGGLIDSLNAEISLGTVASVRDGVSWLGYTYLFTRM KRTPLTYGMTYDEVADDPHLGAKRQQLISNGVKKLVEAKMVEHNPVTDRLQATDLGRIAA KYYIGYRTIETFNERMRSNMSEADVLGLLSQAADFEQIVPRDAEEKELKKMLEAAPCEVS GGIETSPGKVNILLQAYISRTFIEDFALVSDSAYVAQNAGRIIRSLLEIALSRRWARTAS ALISMSKAIEKRMWPFDHPLQQSHLNPDTLYAVTERADDVEIEELAEMSAADIAKLIRVN ARMGSAVKQAARSFPRLATSASMRPLSHDLLRIDVRVDRIFEWSERDLGRLHGFYIWIED EEGSEILQWLTHLTRVTDSHLSNVTFTIPLSDTLPSGLNVRWMSDSWIGSEGSEWIALDD LIVPAKPPLHDTLLDLPLLPVRSALADELLCEMYAQDFSAFNALQTQSFHTLMHTSANTL LCGPTASGKSTVAAMAVWRALHQAVQGCIIIVHSKRDTLASATKSTMVAALKQKRIEVKR SSLSREVLPFVCNDGLGARVLFTTSISLLRALEARQDLVGHVSLLVAEDMHLLDPGYEMM LARFMWCCARSRADSSQGAISMPRIVATSASLSDASSLAQWIGADELSTYNFDPKDRPSI LNTSFQGFDQPHSSGLLKTMVKPAFDKMKECRANGPAIVVVPSIWQCFTAASDLITKAAA DMDIDGYLGLPSEEIESILPHILDTSLHEALVHGIGIVHERTVAQDRTVIEHLYDQHLLK VVIITRDCLWNTTLRAALVVVMSTQYVRISKAHSTGASDRELVDYTLAELGRAQSLAVRP GTLCDPNPPGECLVLCQTDKAKMLEKMLQTGMPLHSCLLQDERGGAPLLATVLGEVVQGA ITREEQVLDVLSWTILPAELMRNPTYYDCECNERHSVAARLTAVASELIQTLCELKLVEK HSESKDGNSSLKYTGLGKALHLQSGSTLMHVVRWFTNLSSKPVSAAKEMDTFTPKARDHK DIDRIEDAPEKEVIEATLSQVPIEWRSAFRLSADKVQHEEEESNGKADEGQGGEEGSEPD KRSRSKIITYGLKHRLLLCLYFAKLDLITPATAKVLGMSRRARKRLQQGDTEQAVDPAVD EPYSERPTDQKAHAKAIEVLRRQQAAQVLALLSSTSIIGGRS NT seq 5889 nt NT seq  +upstreamnt  +downstreamnt atgacattacaaaatcatctgcaatcattcctgtctgccgcgtccagctcacagcgcacg cttgatgccgatcagcagctcattggatcgctccaagccgagcttgacacgctactccgc tcctcgcatcagcagtatggttcgcacatctcgaccactgatgccggcggcatcaaagat atctggtctgaattttaccgctttgcctctatcaatagctccacagagcaagagggtcag gatgcaaatgacctccacacacacgagatggaaacttcggcggcagaacaggcggacggg atcgactaccgcactcatcaaagctcctctcctgctgtagccgggcttcaagatcactta gctcaccttgcgtctattgatccgcaactcgcggacagcttgcgccacacggtagtaact gccttgtcctcatcgagatctggcgacgagatctctgccgagctagccgagaccatcggc ttcgaccaactcgacttggtcgggagcatcataagcgaccgtcaagctgcactctcagct cttcaagctgattcatattcatctccgcacatgagcgggacagaagagctttcgcaccag gagcaagttcagattgctctcccacaccggccgtcccatcatggtgcaacccacgacgct ttccatcgtggcagcagaccccatattcccggctcgcaagtcgtcgtgcagacgcagcag gaacgccaacaagcgcggcgcttcaagaatgatctccgcaaagccaatcgccagcgtatc gtcgacccaagcgaaagtattcgcacttatactccggaggagcttgaacgtattcgtgaa gagagccttgccgctgctgccaatcgtccgctcttcacaggcacggcgacaggagtcgaa caggtgcgctatccgcacgtgttttcgtccggagcccaaggcaatgtgctctcggtgttt ggccagcggtttgctcttcctctgggaaccagccgagaagagaagcagttctacgaagag gtcaccatccccccaccgcgtacagtccccatgcgcacggaagagcgctacattcctatc ccagagatggacccaatctgccgtggtgcgtttcctggctacaagagtctcaatcgactc cagagtgccgtctacccacttgcctacaagaccaatgagaatctgctcgtctgtgcgccg acaggtgcaggaaaaaccgacgtcgccatgctcaccgtcatgcgtgccatcagtcagtat gctcgaaatctggagccaactgcgggcaacgctggccaaggcttcgatatccgaaagaat gatttcaagatcatctacgttgcacctatgaaggcacttgccgcggaagtcgtgcgcaaa ttcagcaagcgccttcaatacctcggcatcaaggtccgcgaactcaccggcgacatgcag atgacacgtcaagagatcgccgagacacagatgatcgtcacaacgcccgagaagtgggat gtcgtgactcgcaaacccaccggtgaaggtgagctcgcaaccaaggtgaggctgctcatc atcgatgaggtccatctcctccacgacgagcgaggttccgtcattgaaaccatcgtcgct cgtaccctgcgtctggtcgagtccagccaatcgctcattcgtatcgtcggactttccgca acgctgccgaattacgtagacgtcgccgactttcttcgcgtcaaccgctggcaaggcctt ttctattttgattcctccttccgtcctgttccgctcgagcagcatttcctcggtgtcaag ggcaaagcgggctcgcagcagtctcgagccaacttggataaggcctgcttcgaaaaggta tcagagctcgtccaagctggccatcaggtcatggtctttgtgcacgcccgcaaagagact gttaagacggcacagacgcttcgagagatgtttcgtgaggaggctatgggcgacatactg caggcgtcggcggacgagaacccgcgcaaggcctttttcaaaaaggagcttcagtccagt cgcaatcgcgagatgaaggagctctttgatacgggcttcggtatccatcatgctggtatg ctgcgaacggaccgtaccctgagcgaacgtatgtttgaagccggcgttacacgcgtgctc tgctgtaccgctacgcttgcgtggggtgtcaacttgcccgcttacgccgtcgtgatcaag ggcacagatgtctacgactcgtctgcaggtaaatttgtcgacctttcgatcctcgatgtg ttgcagattttcggtcgagccggtcgtcctcagtacgaagatctcggtgtcggctacatt ctgacgtcgcaggatcgcctatcgcactacgtcgatgccatcacttcgcagcatcccatt gagtcaaagttcatcggcggactcattgactcgctcaatgccgagatctcgctcggcacc gtcgccagcgttcgcgacggtgtttcttggttgggctacacgtatctgtttacccgtatg aagcgcacgccgctcacctacggtatgacgtacgacgaggtggccgacgatcctcatcta ggagccaaacgacagcagctgatcagcaatggtgtcaagaagctcgtcgaagccaaaatg gtcgagcacaatcccgtcacagatcgtctacaggcgaccgacctaggtcgcattgctgcc aagtactacatcggctaccgcaccatcgagaccttcaacgagcgcatgcgcagcaatatg agtgaggccgatgtgctcggcctgctcagccaagccgctgactttgagcagatcgtacca cgcgacgcggaggagaaggagttgaaaaagatgctcgaagcagcaccgtgcgaagtttcg ggaggcatcgagacgtcgccgggcaaagtcaacattttgctgcaggcgtacatctccagg acgtttatcgaagactttgcgctcgtctcggactcggcctatgttgcgcagaatgctggc cgaatcattcgctctctgctcgagattgcactcagtcgccggtgggctcgcacagcatcc gctcttatttcaatgagtaaagccattgagaagcggatgtggccgtttgatcatccgctg cagcagtcccatctgaacccagacacgctatacgctgtcacagagcgtgctgatgacgtg gagatcgaagagcttgccgagatgtcggctgcagacattgccaagctcatccgcgtcaac gcgaggatgggcagcgcggtgaaacaagcagcacgcagctttccccgtctggcaacgtcg gcatcgatgcgtcctcttagccacgacctcctgcgcatcgatgtgcgggtcgatcgtatt ttcgaatggagcgagcgagatcttggacgcctgcacggcttctacatctggatcgaggat gaagaagggtccgagattctccagtggcttacacatcttacccgagttaccgactcgcac ctttccaacgtgacttttacgatcccgctgtccgacacactgccatcaggcttgaatgtg cgatggatgtcggactcctggattggaagcgaggggagcgaatggattgccttggacgat ctgattgttccggccaagccgcctttgcacgacactcttctcgatctacccctgctgcca gtgcgttctgcacttgccgacgagctgctttgcgagatgtatgcacaagacttcagcgcc ttcaatgcgctacaaacgcaaagtttccacacgttgatgcatacatcggccaatacgctt ctgtgcggacctactgcatcgggaaagtcgaccgttgcggcgatggctgtgtggcgagca ttacaccaggccgtccaaggttgcatcattatcgttcacagtaaacgggatacattggcc tctgctacgaagagcacaatggtagcagcgctcaaacagaagcgcatcgaggtgaaacgc tcctcgctttcgagagaagttctgccatttgtgtgcaacgatggactcggcgcacgagtg ctgttcaccacctccatttctctcttgcgtgctctcgaggcgagacaagatctggtgggt catgtctcgctcctcgttgctgaagacatgcatctgctggatccggggtacgagatgatg ttggcccggttcatgtggtgctgtgcacgctcgcgtgcagacagcagccaaggtgcaatc tcgatgccacgcattgtggcgactagcgcaagtctcagcgacgccagctcgcttgcgcag tggatcggagcagacgagttatcgacgtacaacttcgatcccaaggaccggccatccatc ctgaacacgagttttcaaggctttgaccaaccgcactcgagcggcctacttaaaaccatg gtcaagcctgcatttgacaagatgaaggagtgcagagccaatggacctgctatcgtcgtt gtgccctcgatatggcagtgctttacggctgcttcggacttgatcaccaaggcagctgca gatatggacatagatggctatcttggcctaccctcggaggagatcgaatcaatcttgcca cacatcctcgacacgtcgctgcacgaggcgctggtgcacggcatcggcattgtacacgag aggacagtggcgcaggaccgaaccgtgattgaacacttgtacgaccagcatctgctgaaa gtggtcatcattacccgagactgcttgtggaatacgacattgcgagcggcgcttgttgtg gttatgagcacgcaatacgtgcgcattagcaaggcacacagtacaggcgcatcggatcga gagctggtcgactacacacttgccgaactgggccgagcacagagtttggcagtgcgacca ggaacactttgtgatccgaacccgccaggcgaatgcctcgtgctctgtcagacggacaaa gccaagatgctcgaaaagatgcttcagacgggcatgcctctgcactcttgtttgctgcag gatgagcgtggtggtgcgcctctgcttgccactgtactcggcgaagtcgtgcaaggcgcc attacacgcgaagagcaagttctcgacgtactcagctggaccattctgcctgctgagctg atgcgcaatccgacgtactacgactgtgagtgcaacgagcgacactctgtcgctgctcgg ctgacggcggtggccagcgagctcatacagacgctctgcgagctgaaactcgtcgaaaag cactccgagtccaaggacggtaattcgagtctcaaatacactggtctcggcaaagctctt catctgcaatcggggtcgacattgatgcacgtggtgcgatggttcaccaatctttcaagc aaacctgtgagcgcagcaaaggagatggataccttcacacccaaagctcgcgaccacaag gacatagacaggattgaagacgcaccggagaaagaggtgatcgaggcgacgttgagtcag gttcctattgaatggcggagtgcctttcgtctttctgccgacaaagtgcagcacgaggaa gaagagtccaatggaaaagcagacgaaggacaggggggagaagaggggagcgaaccggac aagcgaagccggagcaaaatcatcacatatggtcttaagcacaggctgttactgtgtctc tactttgccaagttggatctgatcacgccagcaacagccaaagtgctcggaatgagcagg agggcgagaaagcggctccagcagggagatacggagcaagccgttgatcccgctgttgac gagccgtactctgaacgaccaacggatcagaaagcgcacgcaaaagcgatagaagttctg cgaagacaacaggcagcccaagtactcgctttgttgagctcaaccagcatcattggaggt cggagttga

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