KEGG   Mycosarcoma maydis: UMAG_00460
Entry
UMAG_00460        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
uma  Mycosarcoma maydis
Pathway
uma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UMAG_00460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:uma03019]
    UMAG_00460
Messenger RNA biogenesis [BR:uma03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     UMAG_00460
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     UMAG_00460
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 23561756
NCBI-ProteinID: XP_011386323
UniProt: A0A0D1D0Y4
LinkDB
Position
1:1308656..1309795
AA seq 379 aa
MAPQVLSRSQGDFFLRGLTSDPPQRSDGRDLLAFRSLDVETGVAAQANGSSRITLGGTEI
LCGIKAEVRSFGDDSDDEDEEAEFRTQDELELASESRKMGRIKCSVDYSQSLIHSFDSKS
LDSLSISLSSMVNSTFSPRSCPLPLQQLLIIANAKHWTIYIDLLVNSLSGGNLFDAAFAA
IFSAFYDTRVPVTRGVAFEAPTTLDASGKTVQGAFANAQGDLDQMGIKGLLKKKPKSNAA
GPSRNGAGPSSKVVDFELEHSGEDGTTLEGRQDLPLCITVNVLPNSYLLDATVDEEACIG
SRVQVLATRSSKVLCVRSEGTEEIPFKRVSEAIHIGTVQAARLADALLQELTNTAAPNDV
EDQDDLVHASSQGSMDVDA
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggcgccccaggtactgtcacggtcgcaaggcgacttctttcttcgagggctcacatcg
gatccaccacagcgttctgacgggcgagatcttctcgcctttcgttctctcgatgtcgag
acaggcgtggctgcgcaagcaaacggctcttctcgcataacccttggaggtacagagatc
ttgtgcggcatcaaagcggaagtgcgcagctttggagatgatagtgatgatgaagacgag
gaagccgagttccgaacccaggacgagctcgagctggcgagcgaaagcagaaagatgggc
agaatcaagtgctctgtcgactattcgcaatcattgatacattcctttgacagcaaaagt
cttgattcactatcgatatcactctcatctatggtgaattcgaccttttccccgcggtcg
tgcccgcttcccctgcagcagctgctcatcattgccaacgccaagcactggacaatatac
attgatctcttggtcaactcgctctcaggcggcaacctctttgatgctgcttttgcagcc
atattttccgccttctacgatacacgtgtacctgtgacgcgtggtgtagcgttcgaggcg
cctactacactggatgcgtcgggcaagacggtgcaaggcgctttcgccaatgcacagggt
gatctcgatcagatgggcatcaaaggtctgctcaagaagaagcccaaatcgaatgcagcg
ggcccatcgcgcaacggagctgggccaagttcaaaagtggtcgatttcgagctcgagcat
agcggagaggatgggacaacattggaaggacgccaggacttgccgctctgcatcacagtc
aacgttctacccaacagctacttgctagatgccactgtggacgaggaagcgtgtatcggt
tctcgcgtccaggtgctagcgacacgtagctccaaagtactttgcgtgcgctccgaagga
acggaagagatccctttcaagcgcgtcagcgaggcgattcacatcggtactgttcaagct
gcgcgtctagccgatgcattgctacaagaacttacaaatacggctgctcccaatgacgtt
gaggaccaggacgatttggtacacgcctcatctcagggctcgatggacgttgatgcttga

DBGET integrated database retrieval system