Mycosarcoma maydis: UMAG_00460
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Entry
UMAG_00460 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_00460
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UMAG_00460
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
UMAG_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
23561756
NCBI-ProteinID:
XP_011386323
UniProt:
A0A0D1D0Y4
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Position
1:1308656..1309795
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AA seq
379 aa
AA seq
DB search
MAPQVLSRSQGDFFLRGLTSDPPQRSDGRDLLAFRSLDVETGVAAQANGSSRITLGGTEI
LCGIKAEVRSFGDDSDDEDEEAEFRTQDELELASESRKMGRIKCSVDYSQSLIHSFDSKS
LDSLSISLSSMVNSTFSPRSCPLPLQQLLIIANAKHWTIYIDLLVNSLSGGNLFDAAFAA
IFSAFYDTRVPVTRGVAFEAPTTLDASGKTVQGAFANAQGDLDQMGIKGLLKKKPKSNAA
GPSRNGAGPSSKVVDFELEHSGEDGTTLEGRQDLPLCITVNVLPNSYLLDATVDEEACIG
SRVQVLATRSSKVLCVRSEGTEEIPFKRVSEAIHIGTVQAARLADALLQELTNTAAPNDV
EDQDDLVHASSQGSMDVDA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccaggtactgtcacggtcgcaaggcgacttctttcttcgagggctcacatcg
gatccaccacagcgttctgacgggcgagatcttctcgcctttcgttctctcgatgtcgag
acaggcgtggctgcgcaagcaaacggctcttctcgcataacccttggaggtacagagatc
ttgtgcggcatcaaagcggaagtgcgcagctttggagatgatagtgatgatgaagacgag
gaagccgagttccgaacccaggacgagctcgagctggcgagcgaaagcagaaagatgggc
agaatcaagtgctctgtcgactattcgcaatcattgatacattcctttgacagcaaaagt
cttgattcactatcgatatcactctcatctatggtgaattcgaccttttccccgcggtcg
tgcccgcttcccctgcagcagctgctcatcattgccaacgccaagcactggacaatatac
attgatctcttggtcaactcgctctcaggcggcaacctctttgatgctgcttttgcagcc
atattttccgccttctacgatacacgtgtacctgtgacgcgtggtgtagcgttcgaggcg
cctactacactggatgcgtcgggcaagacggtgcaaggcgctttcgccaatgcacagggt
gatctcgatcagatgggcatcaaaggtctgctcaagaagaagcccaaatcgaatgcagcg
ggcccatcgcgcaacggagctgggccaagttcaaaagtggtcgatttcgagctcgagcat
agcggagaggatgggacaacattggaaggacgccaggacttgccgctctgcatcacagtc
aacgttctacccaacagctacttgctagatgccactgtggacgaggaagcgtgtatcggt
tctcgcgtccaggtgctagcgacacgtagctccaaagtactttgcgtgcgctccgaagga
acggaagagatccctttcaagcgcgtcagcgaggcgattcacatcggtactgttcaagct
gcgcgtctagccgatgcattgctacaagaacttacaaatacggctgctcccaatgacgtt
gaggaccaggacgatttggtacacgcctcatctcagggctcgatggacgttgatgcttga
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