Mycosarcoma maydis: UMAG_00599
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Entry
UMAG_00599 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
uma
Mycosarcoma maydis
Pathway
uma03410
Base excision repair
uma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UMAG_00599
03450 Non-homologous end-joining
UMAG_00599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uma03400
]
UMAG_00599
Enzymes [BR:
uma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UMAG_00599
DNA repair and recombination proteins [BR:
uma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
UMAG_00599
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
UMAG_00599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_B_palm
HHH_8
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
23561856
NCBI-ProteinID:
XP_011386423
UniProt:
A0A0D1EA90
LinkDB
All DBs
Position
1:1755912..1757762
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AA seq
616 aa
AA seq
DB search
MSTPTVDASGASTRTAIRYQDSIGSLSRSEKSVQRILSQSTRIHVLRDKLDERSVEELEA
SAQQLGAQLTTSAESANIVVTAIKAPKRILKWIPDGEANVVPPRTERGETGRAREEVQRV
ERQLGEEVLRDWRRFVVTPQWLDAVKAEARLVDPDLFAVVAIKDESKTLESKPSATSDRK
RKHSPSGSPLLAPSHHASPPAVLRRKHLSSSPTPTTASSSYYDAIYPPAPCPRWQNTRYA
CRRPSPLHSPNQALITELELIRTERRLTGDTYSEMAYMRAISALKAFPFPIPDRILDPPE
VFDPALLELRLSEVEKLKGVGKKVFSLIKQFYASENKSGERIVEAKVIARDPAVYIMNAF
TELYGIGPIGAREAYNSGARSFSDVLHRGKSLATHLSVQESVRILADLRKPIGREECRSI
TAHIMALVRSMLADDVEVKYEICGGYRRGKESTYDVDIIIGHSEPPSRALHMRLLNEMKR
KGLITHLVNVSTPASSYLDPDTTIHDKHTPPPVHIDIANIVVLPPLSDRTHLAMHRRVDL
VFCPLRVYGATVLGWTGSMTFERDLRLWAKSKGFNFSFDGLTNLADESLVDTTDEKAVFD
ALDLQYMPPEWRNCDA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaccgacggttgacgcatctggtgcatccacacgcacggcgatccggtaccaa
gacagcatcggctcgcttagccgcagcgaaaagtcggtgcagcgcatcctctcgcagtcg
acacggatccacgttttgcgagataaactcgatgagcgatcagtcgaggagttggaagcg
tcggctcagcagttgggcgcgcagctgacaacaagcgccgaatcagcgaatatagtggtg
acggcaatcaaggcgcctaaaaggatattgaagtggattccggacggggaggcgaatgtc
gtaccgccaaggacggagagaggtgagacgggcagagcaagggaagaggtacagagagtg
gaaaggcagctcggggaggaggtgctgagggattggagacgctttgttgttacaccgcag
tggctggatgcggtcaaggcggaagcaaggttggtggatccagacctgtttgcagttgtc
gcgatcaaggatgagtccaaaacgctagagagcaaaccctctgctaccagcgatcgaaag
agaaagcacagtccaagcggttcaccgctgctcgcaccatcgcaccatgcatcaccacct
gccgtcctccgacgcaagcacttgtcgtcgtcccccacccctacaaccgcgtcctcctcg
tactacgatgccatctacccacccgctccctgtccacgctggcaaaacacgcgttacgcc
tgtcgtcgaccctcgccgctccactctcccaaccaagcactcatcaccgaactcgagctc
atccgcaccgaacgtcgactcaccggagacacgtactcagaaatggcgtacatgcgcgcc
atctcggcactcaaagccttccccttccctattcccgatcgcatcctcgatcctccagaa
gtgttcgacccggcattgttggagttacgcctgagcgaggtggagaagctcaaaggggtg
ggaaagaaagtgttttcgctcatcaaacagttttatgcgtccgagaacaagagtggcgag
aggatcgtggaggccaaggtgatagcgagggatccagccgtgtacatcatgaacgcattc
acagagctgtacggaattggaccgatcggtgcaagggaagcgtacaactcaggagctagg
agcttcagcgatgtgttgcacagaggcaagtcgctggcgacacacctatcggtgcaggag
tcggtgcgtatcctagcagatcttaggaagccaattggaagggaagagtgtcggtccatc
acagcgcacatcatggcgctggtcagatcaatgttagccgacgacgtcgaggtcaagtac
gagatatgtggtgggtataggaggggaaaggagagcacgtatgatgtagacatcatcatc
ggtcatagcgaaccacccagtcgagcgctccacatgaggctgctgaacgagatgaaacga
aagggactcatcacgcacttggtcaacgtcagcacacccgcctcctcgtacctagacccc
gacaccacaatccatgacaaacacacgccaccaccagtgcacattgatatcgctaacatc
gtcgtcctacccccgctctcggaccgcacccatttagcgatgcatcgaagggtcgatctc
gtgttttgcccactgcgcgtctacggcgccaccgtcctcggttggacgggaagcatgaca
tttgaacgcgacctccgactctgggccaaaagcaaaggcttcaacttcagctttgatggg
ctcaccaatctcgctgacgagtctctcgtagacaccaccgacgaaaaggctgtctttgac
gcgttggacttgcagtacatgcctccagaatggcgaaattgcgacgcttga
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