KEGG   Mycosarcoma maydis: UMAG_00922
Entry
UMAG_00922        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
uma  Mycosarcoma maydis
Pathway
uma03022  Basal transcription factors
uma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UMAG_00922
  09124 Replication and repair
   03420 Nucleotide excision repair
    UMAG_00922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uma03021]
    UMAG_00922
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_00922
Transcription machinery [BR:uma03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     UMAG_00922
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     UMAG_00922
SSDB
Motif
Pfam: Tfb4 DUF2242 ROH1-like DUF5684
Other DBs
NCBI-GeneID: 23562085
NCBI-ProteinID: XP_011386929
UniProt: A0A0D1E4P9
LinkDB
Position
2:<310411..>311679
AA seq 422 aa
MPAATTQARSTTEIANAGFSHIQSSKSTGVRTSPDFLVLVLDINPLAWTRRSESLDKGKY
KQVSSDVALEDALAAIMIFLNAHMAMQHENGLAIYAAAGTGTAQLLYSTASFSAKATGTG
VVNSAASTSAQKPDANTYQHFKLVDDHLEQGIRATCKSMFDRAKKAQEAVHASADSEAVK
HATLSRSINVGIVSALSQALCHLNRLGLSDATDAANTGNGIAATAQTRAGGANTAQGAGG
SVGAGSIGSFKSRILILSVTQDASTQYIPMMNCIFAAQKKGITIDVCKLFGKDTVFLQQA
SYLTSGTYFRLADDEDQSKSDTASATDMRSSLVQTLLTTYLPSRSMRGVMNLPSLEKIDF
RAACFCHRKIVDIGYICSVCLSLFCSPKPSCLTCRSKFPKETLQRYENELQFTADAGTAA
PA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgccggcagcaacaacgcaagccaggtcgaccaccgaaatcgccaatgctgggttctcg
cacattcagtcatccaagagcactggggtacgcacctctcccgactttcttgtgctcgtg
ctggacatcaacccactagcatggacgaggcgatccgaatcactcgacaagggaaaatat
aagcaagtttccagcgatgtagctctggaagatgcgcttgctgctatcatgatctttctg
aatgcgcacatggcaatgcagcacgagaacggtcttgccatttatgctgcagcggggaca
ggaaccgcgcaactcctctactcgacagcttcattttcagccaaggcgacgggtacggga
gtagttaattcggctgcgtccaccagcgcacaaaagcccgatgccaatacataccaacac
ttcaaactggtcgacgaccatctcgagcaaggtatccgggctacgtgcaagtcgatgttt
gaccgggcaaagaaagcgcaagaagctgtccatgcaagtgcggatagtgaagcggtcaag
catgcgacgcttagccgctccatcaatgtcggcatcgtgtctgccctctcccaagctctc
tgtcacctcaatcggcttggactgagcgacgctacggacgcggctaatactggcaatggg
atagccgcaacggcgcagactcgagcgggtggcgcaaacacggcgcaaggtgcgggtgga
agtgttggagccggtagcataggcagcttcaagtcgcgtattcttatcctcagcgtgacg
caggacgcctcaacacagtacatcccaatgatgaactgcatttttgcggcgcagaagaag
ggcatcaccatcgacgtctgcaagctgtttggcaaagatactgtctttcttcagcaggcg
tcctacctcacttcgggcacgtacttccgtctcgccgatgatgaggaccagagcaagagc
gatacggcaagcgccacagatatgcggtcgagtctagtgcagactctgcttacgacgtat
ctgccgtcacggtcgatgcgaggcgtgatgaacctgccaagcctcgagaaaattgatttc
agggctgcttgcttctgtcatcgcaagatcgtcgatatcggatacatctgcagcgtctgt
ctgagtttattctgctcgcccaagccctcctgtcttacttgtcggtccaaatttcccaag
gagacgttgcaacggtacgagaatgagctccaattcactgccgatgcgggcactgctgct
ccagcatga

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