Mycosarcoma maydis: UMAG_01262
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Entry
UMAG_01262 CDS
T01021
Name
(RefSeq) putative DNA polymerase X
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
uma
Mycosarcoma maydis
Pathway
uma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UMAG_01262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uma03400
]
UMAG_01262
Enzymes [BR:
uma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UMAG_01262
DNA repair and recombination proteins [BR:
uma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
UMAG_01262
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
UMAG_01262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
23562343
NCBI-ProteinID:
XP_011387187
UniProt:
Q96VE7
LinkDB
All DBs
Position
2:complement(1380025..1382274)
Genome browser
AA seq
749 aa
AA seq
DB search
MSSSSLQRLPSGTHRFNQQYRLIAVAFPVTRHYTAQAGRTKLPIKYVRNRSQDLDKAVFL
VLKGKSDGPLPPPETASRLFEPLPRRAKQHHINKTFQLHASFIQEAIAREQGPVLTHQDG
EWEDVDVDELETRLEIPATRSRLVNQNASQLLPNIHPSSLQSINTNAKLQKRTRPQAVPW
NRHSVNRDTVQADASLRNIHNAITFLQSIEVKLQATDRQLQELALRLGSQQPSSPGAASQ
RVRKICELVVRWLSHFPELMKKASEAAVQTPPPTKWQMFKAMTAAAFCIGGTTVLAPLLK
AMLSFVWVIMPSLHELPVLYPNIHDWLGLVVHTSSLPLLIAMNTRAKKACRRFKHFSISK
NLLHTHQRRQLTQSSQNLGPRKETAFRELIANHPELLDKPFPMTAVLNDLRNLQALRGSS
SGREYKVAERRLFRVQHESELGQGAPLTVRQVTKLLEPDDSVGWTVIKQRLLLDRVDAIN
SLSKEDRARVMFQRVYGIGATKAERFVQAGFLTLEQLREASLERAQRIGLNHMNDIECLI
PRSESQQWLDVLLDVVRSVDSKLSIELLGSFRRGDHYSSDLDFVLFHPDVIEMRLPRPDN
PSKSDPHPLAATLLNNVIVQMRKRNLLADDLLAHGPLAVKGIVRLSATNKARRIDLNFAP
FIRRAFYTLAKTGDADLMVHLRAKAKSKGWALNEYGLGPPNQNGSAWTTNLLQEATDERQ
IFAFLNVPYLKPKERSFSNYASKLKITRP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccagcttacagcgtctgccaagcggaacgcaccggtttaaccagcaatat
cgcctcatcgctgttgcgttcccagtcacacgtcactatacggctcaagctggaaggaca
aagctccccataaaatacgtacgaaaccgctcacaggatctagacaaggctgtctttttg
gtcctcaaaggaaagtctgatggtcccctccctcccccggagaccgcctcgcgcctcttt
gaaccacttcctcgtcgagccaaacagcatcacattaacaagacatttcaactgcatgca
agctttattcaagaagcgatcgctcgcgaacaaggcccagtcctgactcaccaagacgga
gagtgggaggatgtggatgtggatgagctcgagactcgactcgaaatcccggctactcgg
agcaggctggtcaaccaaaacgcttcgcagctactgcccaacattcatccaagcagtctc
cagtcgatcaacaccaacgccaagcttcagaaaaggacaagacctcaagctgtaccgtgg
aaccggcacagtgtcaacagggacacagtccaagctgacgctagtctgcgaaacatccac
aatgcaataaccttcttgcaaagcattgaagtgaaattgcaagccaccgatcgccaactt
caagagttagcgcttcgactcggatcgcaacagccttcttcgccaggggctgccagccag
agagttcgtaaaatctgcgagcttgtcgttcgttggctgtcgcactttcctgagctcatg
aagaaggcgagcgaggctgcggtccagactccgccaccaaccaagtggcagatgttcaaa
gccatgacggcagccgccttctgtatcggaggtacaacggtcctcgctcctctgctcaaa
gcgatgctctcattcgtgtgggtcatcatgccttcacttcacgagctgcctgtgctgtat
cccaatatacatgactggcttgggctagtcgtgcacacgtcttccctaccgcttctgatc
gcgatgaacacacgcgcaaagaaagcttgtcgtcgcttcaagcacttcagcatcagcaaa
aacttgcttcacacccatcaacgtcgccagctcacccaatctagccaaaatctgggtcca
cgtaaggaaacggcgttccgcgagctcatcgccaatcatcctgaactgctcgataagcct
tttcctatgacagccgtattgaacgatcttcgcaacctgcaggctctcagaggtagctcc
agcggtcgagagtacaaggtggcagaacgtcggctgtttcgtgttcagcacgagtccgag
ctcggccaaggtgcgccactgacggttagacaggtgacaaaactgctcgagccggatgat
agtgttggctggacagtgatcaagcaacgtttgctgttggatcgggtggatgcgatcaat
agcctttcaaaggaggatcgtgcaagggtcatgtttcagcgcgtgtatgggatcggcgct
acgaaagccgagcgctttgtgcaggccggatttttgacgctggagcagttgagagaggct
tcgttggagagggcgcaaaggatcgggctcaaccatatgaacgatatcgaatgcttgatt
ccgcgtagtgagtcacagcagtggctggacgtgttgctcgacgtggttcggtctgtcgat
tccaagctgagcatcgaactactgggcagctttcgaagaggcgatcactattcttccgac
ctcgattttgtcctgttccatccagacgtgatcgagatgcgtcttcctcgtcccgacaat
ccttccaaatcggacccacatcctctagctgccacgctcctcaacaacgtcatcgtccaa
atgcgcaaacgcaatctgcttgctgacgacctgctcgcccacggccctctggctgtcaaa
ggtatcgtccgcctctcggcaaccaacaaagcgcgtaggatcgatcttaattttgcgcct
ttcattcgacgcgctttctacacgctcgccaaaaccggcgatgctgacctgatggttcac
cttcgcgccaaggccaaatcgaaaggctgggctctcaacgagtatggactcggtccaccc
aatcaaaacggctcagcttggaccacaaacttgcttcaagaggccacagacgaacgccag
atctttgcttttctcaatgtaccctacctcaaacccaaggagcgatcgttcagcaactat
gcatccaagctcaagatcactcgtccttga
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