KEGG   Mycosarcoma maydis: UMAG_02324
Entry
UMAG_02324        CDS       T01021                                 
Name
(RefSeq) hypothetical protein
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
uma  Mycosarcoma maydis
Pathway
uma03020  RNA polymerase
uma03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:uma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UMAG_02324
  09124 Replication and repair
   03420 Nucleotide excision repair
    UMAG_02324
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:uma03021]
    UMAG_02324
   03400 DNA repair and recombination proteins [BR:uma03400]
    UMAG_02324
Transcription machinery [BR:uma03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     UMAG_02324
DNA repair and recombination proteins [BR:uma03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      UMAG_02324
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 23563100
NCBI-ProteinID: XP_011388641
UniProt: A0A0D1E1J3
LinkDB
Position
5:862077..862514
AA seq 145 aa
MTNAPNRFDLFILGPDEKRVEIVEDTKIPNAATFWFNKEDHTLGNMLRHAVLANPAVLFC
GYKVPHPLEPKVFVKIQTDGSLTPTDALKQGSQKLIAQISSLKGAWRTEVQMSGAGTVDV
GAFGRQDPFEGQAYSGEGASGYVDI
NT seq 438 nt   +upstreamnt  +downstreamnt
atgaccaacgcaccgaatcgattcgacctcttcatcctcggtcccgacgagaagcgagtc
gagatcgtcgaagacaccaagatccccaacgcagccacattttggttcaacaaggaagac
cacacgctcggaaacatgcttcgacacgccgtactcgccaatcccgccgtcctgttctgt
ggctacaaagtgccacatcctctagaaccaaaggtgtttgtcaagatccaaacggatggt
tcattaacacccaccgacgcgctcaagcaaggctcgcagaagctcatcgcgcagatcagt
tcgttgaaaggagcatggcgtaccgaggtgcagatgagcggtgcgggcaccgtcgatgta
ggcgctttcggaagacaggatccctttgaaggtcaagcgtattccggcgaaggcgctagt
ggatatgtagatatctaa

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