Mycosarcoma maydis: UMAG_02425
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Entry
UMAG_02425 CDS
T01021
Name
(RefSeq) putative CCR4-NOT core exoribonuclease subunit protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_02425
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UMAG_02425
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UMAG_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
23563173
NCBI-ProteinID:
XP_011388715
UniProt:
A0A0D1E1T6
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All DBs
Position
5:<1149066..>1150016
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AA seq
316 aa
AA seq
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MAGRIREVWAENLEVEMALLRDTIEKYPYVAMDTEFPGIVARPIGTFKGSSDYHYQTLRC
NVDLLKLIQLGITLCDENGNLPPDVCTWQFNFRFSINDDMCAPDSLDLLTKAGLDFDRHE
RMGIDVEHFGELLITSGLALFDDVKWVSFHSGYDFGYLLKVVTCSPLPAQESDFFALLRV
WFPCIYDIKFLMRSCKTLKGGLQDVADDLQVSRIGQQHQAGSDSLLTATTFFKMRQKYFD
GSIDDSKYLGCLYGFSSSSSHVNGMVHYSQGRPVSVQSFHDASAVPRSVSGGYAAGGYGS
NFGSPFKSTLSASTER
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaaggatacgagaagtatgggcagagaatctggaggtggagatggccctgttg
cgggataccattgaaaagtacccatatgttgccatggacaccgaatttcccggcattgtt
gccaggccaataggcacgttcaaaggctcatcggactaccactaccagaccttgcgctgc
aacgtcgatctgctcaagctcatccaactcggcatcactctctgcgacgaaaacggcaac
cttccacctgatgtctgcacgtggcagttcaacttccgtttcagcataaacgacgacatg
tgtgcacctgactcgctggatctgctcacaaaagccggactggactttgatcgacacgaa
aggatgggcatcgacgttgagcattttggcgagttgctcatcacctcaggactagcgcta
ttcgatgatgtcaaatgggtctcgttccacagtggatacgactttggctatttgctcaag
gtcgtaacgtgcagtccgttgcctgcgcaagaatccgactttttcgccctgctgcgtgtc
tggttcccttgcatctacgacatcaagttcctcatgaggagctgcaagacgctcaagggc
ggtttacaggatgtggcagatgaccttcaggtgagccgtatcggtcaacagcaccaagcg
ggaagcgacagcctgttgacggcaacgaccttcttcaagatgcgacaaaagtactttgac
ggttcgatcgacgattcgaaatatctcggatgtctgtatggcttttcttcgagctcgtcg
catgtcaatgggatggttcattacagtcaaggaaggcctgtatcggtgcagagcttccac
gatgcttcagctgtgccgcggtcagtgtcgggcggatatgctgccggtggttacggttcc
aatttcggcagccctttcaaatcgaccttgtccgcttccactgagcgatag
DBGET
integrated database retrieval system
