Mycosarcoma maydis: UMAG_02501
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Entry
UMAG_02501 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
uma
Mycosarcoma maydis
Pathway
uma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UMAG_02501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_02501
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UMAG_02501
mRNA degradation factors
3'-5' decay
Pan complex
UMAG_02501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
23563235
NCBI-ProteinID:
XP_011388778
UniProt:
A0A0D1E1J8
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Position
5:1377921..1380521
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AA seq
866 aa
AA seq
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MYPYSQSQQPPYHHPHKQQSQPPPHFNHTHHPPSLPHPSQQQHNQPYAQQTTSSTHLHSR
PAMQQHHHSQHQIQSSAFNGALPPRPTRSSAIPIVAPASTPAPPAAPSKSAISYGAATAV
GTPPQSETPKSPIASNANASARKPCRNVAIYGNCKYQNDGCPFDHASASTSSSAVQQLKS
PASQNASALSAASPANSPNKTRGALNPPSSPLKGSLSARNVAAAVFVPKVNGSSSPSLSV
ASPAPASRSTLDAVTSELSDLRVDSSTTNQVSPSAYTHNGPSTPNMYTSSYDVDPLSSSF
DPTHPSSTAAHDQQIATATPSAHASRPYNPYEHMNEFGDPSPGQGPPGIGLSAGIDYYSA
AANGAAKIRQPLHYHLYAPPLPHVSNLHPHHLTANAFFLHPNQREELQRKQEAMLASVPP
PELGGPNLPEELHVYHSLVPLEHPGPGAPSTMGMPPGLIDPRMGNPGSNGATGASGDHSK
VFGYRSHSYKATCTLDGKRYVLRRLESFRLQHEAAIALVERWRRIRHPSIVSVREAFTTR
AFGDQSIVFVYDYHPLATTLYAEHMTIKAAQPDRRTGRLQPVSMQVPERTLWSYLCQLTS
ALRSIHSSNLAARCIEASKVLRTGKNRVRINCCSVFDVIAYNPDETGSDALKAQQQEDMV
NLGALIVSIGLNSISATNDIASSLATFAGRYSAELKNVVAWLVAQTPAPYESVGGDDVVE
VARNVTELIKVLGSHCADEMDSALNYTDLMENSLMKELENGRLVRLLCKFGFINERPEFD
HDPRWAETGDRYVIKLFRDHVFHSVDEAGRPVVDLSHILTNLNKLDAGTDEKIMLTSRDE
QSCLVVSYREIKNCIESAFQDLSRTR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctattcgcagtcgcagcaaccgccgtaccaccatccgcataaacagcaatca
caacctccacctcattttaaccacacacatcatcctccctctctgccccacccttcccaa
cagcagcataaccagccatacgcgcagcaaacaacatcgtctacacacctgcacagtcgg
cctgccatgcagcaacatcatcattctcagcatcaaatccagtcgtccgcgttcaacggc
gccttgcctccaaggcccacccgcagctccgccatccccatcgtagcccctgcctccact
ccggctcctccagctgcaccctcaaagtccgcgatctcctacggtgctgcaactgctgtc
ggtacaccgccacagtcagaaacaccaaagtctcccatcgcctccaatgccaacgcatca
gcgcgcaaaccgtgtcgcaacgtagccatctatggcaactgcaagtatcagaatgacggt
tgccccttcgatcacgcctctgcttccacttcgtcctctgccgtacagcagctcaagtct
cccgcttctcaaaatgcttccgcactatcagccgcctcgcctgccaattcgcccaacaag
accagaggcgccctcaatcctccctcaagtccactcaagggctccctcagcgctcgcaac
gtcgcagccgccgtctttgtgcccaaggtcaatggaagctcctcgccctcgctctctgtc
gcctcacctgccccagcttccagatccactctcgatgccgtcacctccgagcttagcgac
ctgagagtcgattcgtccaccaccaaccaagtgtctcccagtgcatacacccacaacggc
ccctccacacccaacatgtacacctccagctacgacgttgaccccctcagtagctctttt
gatcctacccatccaagcagcacggctgcacacgatcagcagatcgccacggctactcct
tcggcacatgcctcgcgtccctacaacccctacgagcacatgaacgagtttggcgaccca
tctccaggacaaggcccgcccggtatcggtcttagcgctggtatcgactactactcggct
gccgcaaacggtgccgctaagatccgtcagccgctccactaccacctctacgcaccgccg
ttgccgcacgtctccaacttgcatccccatcacctcaccgccaacgctttcttcctccac
cccaatcaacgcgaggagctgcagcgcaagcaagaggcgatgcttgccagcgtccctcct
cccgagcttggcggtcccaacctacccgaagagctgcacgtctatcactcgctagtgcca
ctcgagcatcctggtcccggcgctccttccaccatgggcatgcctcccggacttatcgac
ccccgcatgggcaatcctggttccaacggtgccacgggcgcctcgggcgatcacagcaaa
gtgttcggatatcgaagccactcgtacaaggccacttgcacgcttgatggcaagcgatac
gtgctgcgcaggcttgagagctttcgactgcaacacgaggctgccatcgctctggtcgaa
cgctggcgtcgcattcgccatcctagcatcgtcagcgttcgcgaagctttcactacacgc
gctttcggcgatcagtcgattgtctttgtctacgactaccatcccttggccactacgctc
tacgcagagcacatgaccatcaaggcagctcaacccgatcgtcgcaccggtcgattgcag
cccgtttccatgcaggtacccgaacgcaccttgtggagctacctctgccagttgacctcg
gcactccgttccatccactcgagcaatctcgccgcgcggtgcatcgaagccagcaaggtt
ctgcgcacgggcaagaatcgtgtccgtatcaactgctgctccgtctttgacgtgattgcc
tacaatcctgacgaaactggctcggacgcgctcaaggctcagcagcaagaggatatggtc
aacctcggtgcgctcatcgtcagcattggcctcaacagcatctctgcgaccaacgacatt
gcttccagtttagccacctttgctggtcgctactctgctgagctcaagaatgttgtcgca
tggctggtggcgcagacgcctgctccttacgagtctgtcggcggcgacgatgtggtcgag
gtcgctcgcaacgtcaccgagctgatcaaggtgctcggcagccactgcgccgacgagatg
gattcagcgctcaactacaccgacttgatggaaaattcattgatgaaggagctcgaaaac
ggtcggctggtgcgcttgttgtgcaaatttggctttatcaacgagcgccccgagtttgac
cacgatccgcgttgggcagagaccggtgatcgttacgtgatcaaactgttccgcgaccac
gtcttccactcagtcgacgaagccggtcgtcccgtggtggatctgagtcacatcttgacc
aacctcaacaagctcgacgccggcaccgacgaaaagattatgctcacctcgcgcgatgaa
caaagctgcctagtggtaagctaccgagagatcaagaactgcatcgagagtgctttccag
gatctgtcacgaacacgctag
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