Mycosarcoma maydis: UMAG_03025
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Entry
UMAG_03025 CDS
T01021
Name
(RefSeq) putative DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
uma
Mycosarcoma maydis
Pathway
uma03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UMAG_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uma03400
]
UMAG_03025
DNA repair and recombination proteins [BR:
uma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UMAG_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
Motif
Other DBs
NCBI-GeneID:
23563613
NCBI-ProteinID:
XP_011389403
UniProt:
A0A0D1DZP4
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Position
7:complement(647699..650590)
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AA seq
963 aa
AA seq
DB search
MSGLMYDGPSSSEKPDLGLDNAAESSFCQTFKSMPKPTPGTLRLFDRSDFYSAHGDDAIL
IANLVFKTHSALKYLGSGGKDNGGLPSITLSVAATKNLLREVLTSRQMRVEIYGNAGAKR
NNQWSIVKQASPGNLQQMEDMIFVDADIVSSPIVMALKLTTRDGVKTVGAAFADATNREL
CVSEYAENDLFSNTESLIIQLGVKECILPKDDKGVDADLKKLREVIERCGVVMFDSKRAD
FSGRNIDQDLRRLLKEESCGLNLTELDLKLAMAAASALMSYLALLTDESNFGQYSIRTHD
LSQYLRLDNSALRALNLFPEPGQTGSSKNTSIYGLLNRCRTGQGQRLLGQWLKQPLVNVH
AIEQRQNLVELFVNDNSTRQLIQNDYLKLMPDMHRISKRFQKGIATLEDVVRVYQAILRL
PGLIQTLADMETPSEALSELLKTSYLDPFEAHRAALTKFNELVEATLDLTELSQHNFVIK
PDFDDNLREIKEALDDTRDKLDEQHRLAGKELRMDTEKKLHLENHHVYGYCLRVTRTDAG
LVRNKKGYMDIATVKGGLYFTNEALRDLANDFKDLSERYSRSQSGLVKEVIQIASSYCPP
LEKLNVVLAHLDVIVSFAHVSDSAPVPYVKPVVSEKGTNADVDLREARHPCLEVMDDINF
ISNDTEMVRGQSEFLVITGPNMGGKSTYIRQVGIIALMAQIGCFVPAAQGARLPVFDCIL
ARVGAGDSQLKGVSTFMAEMLETATILKTATSDSLIIIDELGRGTSTYDGFGLAWAISEW
IATNIRCKCLFATHFHELTNLAAQQPHVRNLHVVALVKQKEGGSRQDRDITLLYKVQPGI
SDQSLGINVAELANFPPSVIALAKRKAEELEDYDVDEQTASVLDSLPEDVTKQGAALINE
FLKTWAERSGLVAQQGVWVGKETKRSRLEADPEAELQQLRQVVDEFRPRIEANAWAAKVL
ESF
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcctcatgtatgatggtccgtcctcgtccgaaaagccagacctcggcttggac
aatgccgctgaaagctctttctgtcagactttcaagtctatgcccaagccgacgccagga
accttgcgtctcttcgaccgctccgacttctactcggcgcatggagatgatgctattctc
atcgccaaccttgtcttcaagactcactcggcactcaagtatctcggcagcggcggcaag
gacaacggcggcttgccttccatcactcttagtgtagcagccaccaaaaacttgctccgt
gaagtcctcacctctcgtcagatgcgcgtcgagatctacggaaatgccggggccaagcgc
aacaatcagtggtccatcgtcaagcaggcttctccaggtaacctgcagcaaatggaagac
atgatctttgtcgatgccgacattgtcagctcccccatcgtcatggcgctcaaattgacc
acccgagacggagtcaagaccgtcggtgctgccttcgccgacgccaccaacagagagctc
tgcgtgtctgaatatgcggaaaacgatctcttcagtaacacagagtcgctcatcattcag
ctcggtgtcaaggagtgcatcctgcccaaggacgacaaaggcgtcgacgccgatctcaaa
aagctgcgcgaagtcatcgaacgttgcggcgtcgtcatgtttgacagcaaacgcgctgac
ttttccggtagaaacatcgatcaagacttgcgccgcttgcttaaggaagagtcttgcggt
ctaaatctcaccgagctcgacctcaagctcgccatggcggcggcatctgccctcatgtcg
tacctcgccctgctcaccgacgagtccaactttggccagtacagtatccgcacccacgac
ctctcacaataccttcgcctcgacaactctgcgttgcgtgcactcaacctgttccctgag
ccaggtcagactggatccagcaagaacactagcatctatggccttctgaatcgctgtcgc
accggtcaaggccagcgcttgctcggccagtggctcaagcagccgcttgtcaacgtccac
gctatcgagcaaaggcagaacttggtggagctattcgttaacgacaacagcacacgtcag
ctcatccaaaacgattatctcaagctcatgccggacatgcatcgcatcagcaagcgtttc
caaaaagggatcgccacattggaggatgtcgtacgtgtctatcaggcaattctcagacta
cctggcttgattcagacgctcgctgatatggagacgccttcagaagctctttcagaattg
ctcaagaccagttatcttgatccttttgaggctcatcgggcagcactcaccaaattcaac
gagctggtagaagctacgctcgaccttaccgagctttctcagcataactttgtcattaag
cctgactttgacgacaatctgcgcgagatcaaggaagcgctcgatgacacccgtgacaag
cttgacgagcagcaccgactagcaggcaaggaactccgcatggacacagagaagaagctg
catctggagaaccaccacgtgtacggttactgcttgcgggtcacgcgtacagacgcgggt
cttgtacgcaacaagaagggctacatggacattgccacggtcaaaggcggactctatttc
accaacgaagctctgcgcgatctggccaatgactttaaagatttgtcggaacgctacagt
cgttcgcaaagtggtctagtcaaagaggtcattcagatcgcctcgtcctactgccctccc
ctggagaagcttaacgtcgtgctcgcacacctcgatgtgattgtcagcttcgctcatgta
tcggacagcgcacctgtcccgtatgtcaagccagtcgtgagcgagaaagggaccaacgcc
gacgttgatttgcgtgaggccagacatccctgcctcgaagtgatggacgacatcaacttt
atctcgaacgacacagagatggtgcgtgggcagtccgagtttttggtcatcacaggaccc
aacatgggcggcaagtcgacctacattcgtcaggttggcatcatcgctctcatggcacag
ataggttgctttgttcccgccgcacagggcgccaggctgcctgtctttgactgcatcctc
gcacgagtcggtgcgggcgacagccagctcaagggcgtttccacattcatggccgagatg
cttgaaaccgcgaccattctcaagacggccacgtccgattcgctcatcatcatcgacgag
ctcggacgaggcacttcgacctacgacgggtttggtctggcgtgggccatttccgagtgg
atcgccaccaacatccgatgcaagtgtctgttcgcaacccacttccacgagcttaccaac
ttggcggcacaacaaccccatgtgcgcaacctgcacgtcgtggcgctggtcaagcagaaa
gagggcggatctcgtcaggatcgcgacatcacattgttgtacaaggtgcagccagggatc
agtgaccaaagtttgggtatcaatgtcgctgagctggccaacttccctccttcggtgatc
gcgctggcaaagcgaaaagcggaggaactcgaggactacgatgtagacgagcaaaccgcc
tcggtgctcgatagtctgccggaggatgtgacgaagcagggtgccgcgttgatcaacgag
ttcctcaaaacgtgggctgagcggagtggattggttgcgcagcaaggggtgtgggttgga
aaggagaccaagcgttcgcgactggaagcagatccggaagcagaattgcagcaactcagg
caggtggttgacgagttccgacctcgcatcgaggcgaatgcttgggctgccaaggtattg
gaaagcttttaa
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