Mycosarcoma maydis: UMAG_03348
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Entry
UMAG_03348 CDS
T01021
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
uma
Mycosarcoma maydis
Brite
KEGG Orthology (KO) [BR:
uma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uma03019
]
UMAG_03348
04131 Membrane trafficking [BR:
uma04131
]
UMAG_03348
Messenger RNA biogenesis [BR:
uma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
UMAG_03348
Membrane trafficking [BR:
uma04131
]
SNARE
SNARE associated proteins
Others
UMAG_03348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Caps_syn_GfcC_N
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
23563826
NCBI-ProteinID:
XP_011389738
UniProt:
Q4P965
LinkDB
All DBs
Position
8:complement(686823..689009)
Genome browser
AA seq
728 aa
AA seq
DB search
MSDFGLLRSPLTPSNASINRASSPSGHRPITMNPHSRYSLGKGASTEHMMRLAQHGNAGH
DGALRSPSIGGNAPMPGSAGPRNLRPSSEMLPNMNHHGTPESEAIDRWFEDLQHYEATLE
EMAAASLDQNFKEELSAIEQWFRVLSEAERTAALYSLLQESTQVQIRFFITVLQQMARSD
PVSALLSPSHHNSTMADQMEAKLASLGLKSPSALKSPASPGNRGYRQSSDAAGFLSPNVA
AMYSPGNTDAASTLAAQRAKLKANRTSAPGTLIGESRNYSGGQLDQVQERGGSPNLQQQR
TLSGDHSRPKSTDFSNNNVGRSPRASGPLDDQLSPISATGNWSSMVNTPLVPMFTDNDKA
GTGEANVNLDTAAAQLASLQQQQQVGGNGRVMVDPDVPRFRRKSNQNIGGGGSSYGQGPN
LYDHTSPGVSPNIGVPSGWGQSDNFGRGGLNTGLSAFGGNNDSNSNQFNIPPMSPNALAG
LQSPSGGLANPLNMQVMNMMAAMGGLNLNNMNGAQLLAMQQQLLQNQQALSMLAQQQQLQ
QQQPHGRNLGNFGGGGLSPGLAGQAGRKSPRSGTSPSVRAAALPGAAGGAGSGGAGASNA
AGGEEEVADLSTLEDVPAWLRQLRLHKYTPNFETSHWKEMVMMGDKQLEDKGVAALGARR
KMLKTFELVRKKYGIRMDGEDRPGSGVPDGNNDKAADVDDAGDSNEAQEVDRELGGAATA
ASAPVAKD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcggccttttgcgatcccctctgacgccttccaacgcctcgatcaaccgc
gccagctcgccctctggacatcgtcctatcactatgaacccacacagccgctactcgctc
ggcaagggcgcctccacggagcacatgatgcgtctcgcccaacacggcaacgctggtcat
gacggcgctctccgtagcccctccataggcggcaatgctcccatgcccggctcggctggg
ccgcgcaatctgcgtcccagctcggaaatgcttcccaacatgaaccaccacggcaccccc
gagtccgaagccattgaccgttggttcgaggacctgcagcactacgaagctacgctcgaa
gagatggccgccgcctcgctcgaccaaaatttcaaggaagagctcagcgccatcgaacag
tggttccgtgtgctgtccgaggccgaacgcaccgctgctctgtacagcttgctccaagag
tccacacaggtccaaatccgctttttcatcaccgtgcttcaacagatggcacgcagcgat
cccgtctcggccttgctttcgcccagccaccacaatagcaccatggcggatcaaatggag
gccaagctcgccagccttggcctcaagtccccctcggccctgaaatcccccgcttcgcct
ggcaatcgtggttatcgccagtcttcggacgccgccggatttctgtcgcccaacgtggct
gccatgtacagccctggcaacacggatgctgcttccactcttgctgctcagagggccaag
ctgaaagccaaccgcacttccgcgcccggcacgctgatcggtgagagccgcaactactcg
ggcgggcagctggaccaggtgcaagagcgcggtggctcgcccaacctgcagcagcagcgc
acactctctggggaccactcgcgacccaagtcgaccgatttcagcaacaacaacgtcggc
cgctcccctcgagccagcggaccgcttgacgaccagctgtcgcccatcagcgctacgggc
aactggtcgagcatggttaacacgcctctggtgcccatgtttaccgacaatgacaaggct
ggcaccggtgaggctaacgtaaatctcgacactgccgccgctcaattggctagcctgcag
cagcagcaacaggtcggcggcaacggccgcgtgatggtggacccggatgtgccgcgattc
cgacgcaagagcaaccagaacatcggcggaggcggcagcagctacggccaaggacccaac
ctgtacgaccacaccagcccgggcgtctcgcccaacattggcgttccgtctggctggggt
cagagcgacaactttggacgcggtggcctgaataccggcttgtctgctttcggcggcaac
aacgacagcaacagcaaccagttcaacattcctccaatgagccccaacgcgctcgcaggt
ctgcaaagtccctcaggcggactagccaacccgctcaacatgcaagtgatgaacatgatg
gcagccatgggcggactcaatttgaacaacatgaatggcgcgcagctcctcgccatgcaa
caacaactgttgcagaaccagcaggcgctctcgatgctcgctcagcagcagcagttgcaa
cagcagcagccacatggccgcaaccttggcaatttcggcggcggaggcttgtcgcccggt
ttggcgggccaggcgggtcgcaagagcccgcgcagcggcacatcgccctcggtccgagcg
gctgctctacccggcgcagctggcggcgctggcagtggtggtgctggagccagcaacgcg
gctggaggtgaggaagaagttgcggatctgtctacgctggaagacgtgcctgcatggctg
cgccagctgcgtctgcacaaatatacgcccaactttgagacgagccactggaaggagatg
gtgatgatgggtgataaacagctcgaggacaagggtgtggctgcgttgggcgcacgacgc
aagatgctcaagacgtttgagctggtacgcaaaaagtacggcatcaggatggacggcgag
gataggccaggatcgggtgtgcccgacggtaacaacgacaaagcagcggacgtcgatgat
gcgggagacagcaacgaggctcaggaggtggatcgcgagcttggcggtgctgccacggct
gcttcagccccggtcgcaaaggattaa
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